MDP0000608923 (Malus domestica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 MDP0000608923 T229101_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAT2
M06929_2.00 		Arabidopsis thaliana
NHAATGATTRN
NYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT2_colamp_a 		0.831 0.877
HAT2
M06930_2.00 		Arabidopsis thaliana
WNYAATCATWD
HWATGATTRNW		 Dap-seq
OMalley et al.(2016)
HAT2_col_v31 		0.831 0.877
HAT22
M06926_2.00 		Arabidopsis thaliana
NNYAATCATT
AATGATTRNN		 Dap-seq
OMalley et al.(2016)
HAT22_col_a 		0.823 0.789
HAT1
M02047_2.00 		Arabidopsis thaliana
NMATGATTRN
NYAATCATKN		 PBM
Weirauch et al.(2014)
pTH8107 		0.801 0.860
HAT1
M06922_2.00 		Arabidopsis thaliana
NHAATGATTRNNWDW
WHWNNYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT1_col_a 		0.801 0.860
HAT1
M06923_2.00 		Arabidopsis thaliana
NYAATCATTDN
NHAATGATTRN		 Dap-seq
OMalley et al.(2016)
HAT1_colamp_a 		0.801 0.860
ATHB-4
M01065_2.00 		Arabidopsis thaliana
NBMTGCATRNN
NNYATGCAKVN		 PBM
Sullivan et al.(2014)
pTH8184 		0.793 0.877
ATHB-4
M02042_2.00 		Arabidopsis thaliana
NNWTNATTRN
NYAATNAWNN		 PBM
Weirauch et al.(2014)
pTH8667 		0.793 0.877
HAT3
M00728_2.00 		Arabidopsis thaliana
DTGATTRV
BYAATCAH		 PBM
Chang et al.(2013)
pTH7400 		0.793 0.842
ATHB-X
M06902_2.00 		Arabidopsis thaliana
HHAATRATTRN
NYAATYATTDD		 Dap-seq
OMalley et al.(2016)
ATHB18_col_a 		0.773 0.684
ATHB-X
M06903_2.00 		Arabidopsis thaliana
NYAATGATTRV
BYAATCATTRN		 Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a 		0.773 0.684
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000608923 Homeodomain 113 169

Links

Other Homeodomain family TFs
Other Malus domestica TFs

694 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R005132 Aptenodytes forsteri Afo_R005132 N
Alligator_sinensis_CCG012870.1 Alligator sinensis Alligator_sinensis_CCG012870.1 N
Cmyd_10005483 Chelonia mydas Cmyd_10005483 N
ZBTB5 Anolis carolinensis ENSACAG00000011965 N
ENSAMEG00000019436 Ailuropoda melanoleuca ENSAMEG00000019436 N
ENSAMXG00000004140 Astyanax mexicanus ENSAMXG00000004140 N
ENSAPLG00000001994 Anas platyrhynchos ENSAPLG00000001994 N
ENSAPLG00000002091 Anas platyrhynchos ENSAPLG00000002091 N
ZBTB5 Bos taurus ENSBTAG00000007761 N
ZBTB5 Canis familiaris ENSCAFG00000029817 N
ZBTB5 Choloepus hoffmanni ENSCHOG00000007877 N
ZBTB5 Callithrix jacchus ENSCJAG00000010502 N
ENSCSAG00000000456 Chlorocebus sabaeus ENSCSAG00000000456 N
ZBTB5 Dasypus novemcinctus ENSDNOG00000010253 N
Zbtb5 Dipodomys ordii ENSDORG00000013170 N
ZBTB5 Equus caballus ENSECAG00000004450 N
ZBTB5 Erinaceus europaeus ENSEEUG00000011920 N
ZBTB5 Echinops telfairi ENSETEG00000002372 N
ENSFALG00000012967 Ficedula albicollis ENSFALG00000012967 N
ZBTB5 Felis catus ENSFCAG00000013080 N
ZBTB5 Homo sapiens ENSG00000168795 N
ZBTB5 Gallus gallus ENSGALG00000005354 N
ZBTB5 Gorilla gorilla ENSGGOG00000003712 N
ENSGMOG00000003377 Gadus morhua ENSGMOG00000003377 N
ENSLACG00000004172 Latimeria chalumnae ENSLACG00000004172 N
ZBTB5 Loxodonta africana ENSLAFG00000014479 N
ENSLOCG00000012855 Lepisosteus oculatus ENSLOCG00000012855 N
ENSMEUG00000011041 Macropus eugenii ENSMEUG00000011041 N
ZBTB5 Meleagris gallopavo ENSMGAG00000016120 N
ENSMICG00000003671 Microcebus murinus ENSMICG00000003671 N
ZBTB5 Myotis lucifugus ENSMLUG00000012686 N
ZBTB5 Macaca mulatta ENSMMUG00000017894 N
ZBTB5 Monodelphis domestica ENSMODG00000025213 N
ENSMPUG00000018533 Mustela putorius furo ENSMPUG00000018533 N
Zbtb5 Mus musculus ENSMUSG00000049657 N
ENSNLEG00000003629 Nomascus leucogenys ENSNLEG00000003629 N
ZBTB5 Oryctolagus cuniculus ENSOCUG00000007041 N
ZBTB5 Otolemur garnettii ENSOGAG00000012980 N
ENSONIG00000008925 Oreochromis niloticus ENSONIG00000008925 N
ZBTB5 Oryzias latipes ENSORLG00000005151 N
ENSP00000307604 Macaca fascicularis ENSP00000307604 N
ENSP00000307604-D1 Bos grunniens ENSP00000307604-D1 N
ENSPFOG00000019621 Poecilia formosa ENSPFOG00000019621 N
ENSPPYG00000019062 Pongo abelii ENSPPYG00000019062 N
ENSPSIG00000003260 Pelodiscus sinensis ENSPSIG00000003260 N
ZBTB5 Pan troglodytes ENSPTRG00000020941 N
ZBTB5 Pteropus vampyrus ENSPVAG00000007939 N
Zbtb5 Rattus norvegicus ENSRNOG00000012726 N
ZBTB5 Sorex araneus ENSSARG00000012933 N
ENSSHAG00000015981 Sarcophilus harrisii ENSSHAG00000015981 N
ENSSTOG00000027806 Ictidomys tridecemlineatus ENSSTOG00000027806 N
ZBTB5 Taeniopygia guttata ENSTGUG00000007188 N
ZBTB5 Tetraodon nigroviridis ENSTNIG00000017813 N
ZBTB5 Takifugu rubripes ENSTRUG00000006314 N
ENSTSYG00000014359 Tarsius syrichta ENSTSYG00000014359 N
ZBTB5 Tursiops truncatus ENSTTRG00000008293 N
Myotis_brandtii_ZBTB5_10017822 Myotis brandtii Myotis_brandtii_ZBTB5_10017822 N
Pvit_15550 Pogona vitticeps Pvit_15550 N
Tal_R000100 Tyto alba Tal_R000100 N
zbtb5 Xenopus tropicalis XB-GENE-1015618 N
zbtb5.L Xenopus laevis XB-GENE-1015624 N