Thhalv10006792m.g (Eutrema salsugineum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Thhalv10006792m.g T229547_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-9
M06898_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
PHV_col_a 		0.867 1.000
ATHB-9
M02682_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 SELEX
Mathelier et al.(2014)
MA0573.1 		0.867 1.000
ATHB-9
M10623_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 Transfac
Matys et al.(2006)
P$ATHB9_01 		0.867 1.000
ATHB-15
M00864_2.00 		Arabidopsis thaliana
AATAATTACT
AGTAATTATT		 PBM
Franco-Zorrilla et al.(2014)
ICU4 		0.861 0.911
ATHB-15
M06899_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
ATHB15_col_a 		0.861 0.911
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10006792m Homeodomain 22 81

Links

Other Homeodomain family TFs
Other Eutrema salsugineum TFs

335 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CADAFLAG00007389 Aspergillus flavus CADAFLAG00007389 N 0.000
AFUA_2G12310 Aspergillus fumigatus CADAFUAG00004597 N 0.000
CADANGAG00001949 Aspergillus niger CADANGAG00001949 N 0.000
ANIA_06295 Aspergillus nidulans CADANIAG00006694 N 0.000
CADAORAG00008459 Aspergillus oryzae CADAORAG00008459 N 0.000
NFIA_087460 Neosartorya fischeri CADNFIAG00007876 N 0.000
fgenesh1_pm.00866_#_212 Aspergillus carbonarius fgenesh1_pm.00866_#_212 N 0.000