Thhalv10018381m.g (Eutrema salsugineum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Thhalv10018381m.g T229582_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.780 0.673
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.636 0.571
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.611 0.429
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.611 0.429
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.611 0.429
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.611 0.429
KNAT3
M02051_2.00 		Arabidopsis thaliana
NNNGACVBNN
NNVBGTCNNN		 PBM
Weirauch et al.(2014)
pTH7600 		0.601 0.429
KNAT4
M01238_2.00 		Arabidopsis thaliana
NNGACNNNN
NNNNGTCNN		 PBM
Lambert et al.(2019)
pTH9968 		0.601 0.408
KNAT7
M01064_2.00 		Arabidopsis thaliana
TGACRKST
ASMYGTCA		 PBM
Sullivan et al.(2014)
pTH9798 		0.600 0.388
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10018380m Homeodomain 371 422
Thhalv10018381m Homeodomain 371 422

Links

Other Homeodomain family TFs
Other Eutrema salsugineum TFs

1214 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB00149.1 Alternaria brassicicola AB00149.1 I 0.000
ACRE_076520 Acremonium chrysogenum ACRE_076520 I 0.000
BBA_03262 Beauveria bassiana BBA_03262 I 0.000
Bcin08g03550 Botrytis cinerea Bcin08g03550 I 0.000
BDDG_01946 Blastomyces dermatitidis BDDG_01946 I 0.000
BGHDH14_bgh04658 Blumeria graminis BGHDH14_bgh04658 I 0.000
ACLA_091820 Aspergillus clavatus CADACLAG00008439 I 0.000
AFUA_2G03020 Aspergillus fumigatus CADAFUAG00003420 I 0.000
ANIA_04524 Aspergillus nidulans CADANIAG00005916 D 0.000
CADAORAG00008664 Aspergillus oryzae CADAORAG00008664 I 0.000
NFIA_035370 Neosartorya fischeri CADNFIAG00003845 I 0.000
CCM_01606 Cordyceps militaris CCM_01606 I 0.000
CFIO01_13556 Colletotrichum fioriniae CFIO01_13556 I 0.000
CGGC5_5234 Colletotrichum gloeosporioides CGGC5_5234 I 0.000
CH063_08705 Colletotrichum higginsianum CH063_08705 I 0.000
CHGG_05536 Chaetomium globosum CHGG_05536 I 0.000
CIMG_04575 Coccidioides immitis CIMG_04575 I 0.000
Cob_12050 Colletotrichum orbiculare Cob_12050 I 0.000
COCC4DRAFT_156032 Bipolaris maydis COCC4DRAFT_156032 I 0.000
COCCADRAFT_36163 Bipolaris zeicola COCCADRAFT_36163 I 0.000
COCMIDRAFT_32036 Bipolaris oryzae COCMIDRAFT_32036 I 0.000
COCSADRAFT_213056 Bipolaris sorokiniana COCSADRAFT_213056 I 0.000
COCVIDRAFT_83639 Bipolaris victoriae COCVIDRAFT_83639 I 0.000
CPC735_072160 Coccidioides posadasii CPC735_072160 I 0.000
CPUR_06379 Claviceps purpurea CPUR_06379 I 0.000
CSUB01_05543 Colletotrichum sublineola CSUB01_05543 I 0.000
CTHT_0071270 Chaetomium thermophilum CTHT_0071270 I 0.000
EPUS_02974 Endocarpon pusillum EPUS_02974 I 0.000
estExt_fgenesh1_pg.C_10925 Cryphonectria parasitica estExt_fgenesh1_pg.C_10925 I 0.000
estExt_fgenesh2_pg.C_200015 Neurospora discreta estExt_fgenesh2_pg.C_200015 I 0.000
estExt_Genewise1Plus.C_21297 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_21297 I 0.000
EV44_g5855 Erysiphe necator EV44_g5855 I 0.000
e_gw1.00009.336.1 Aspergillus carbonarius e_gw1.00009.336.1 I 0.000
F503_08470 Ophiostoma piceae uamh F503_08470 I 0.000
FFUJ_07927 Fusarium fujikuroi FFUJ_07927 I 0.000
fgenesh1_pg.sca_20_chr6_4_0000490 Nectria haematococca fgenesh1_pg.sca_20_chr6_4_0000490 I 0.000
FGRRES_02538 Fusarium graminearum FGRRES_02538 I 0.000
FOXG_10566 Fusarium oxysporum FOXG_10566 I 0.000
FPSE_08658 Fusarium pseudograminearum FPSE_08658 I 0.000
GGTG_01117 Gaeumannomyces graminis GGTG_01117 I 0.000
GLRG_00217 Colletotrichum graminicola GLRG_00217 I 0.000
GMDG_07087 Pseudogymnoascus destructans GMDG_07087 I 0.000
GSTUM_00007236001 Tuber melanosporum GSTUM_00007236001 I 0.000
H072_4198 Dactylellina haptotyla H072_4198 I 0.000
H101_05733 Trichophyton interdigitale H101_05733 I 0.000
HCBG_00496 Histoplasma capsulatum HCBG_00496 I 0.000
HMPREF1624_06657 Sporothrix schenckii HMPREF1624_06657 I 0.000
LEMA_P069020.1 Leptosphaeria maculans LEMA_P069020.1 I 0.000
M7I_1326 Glarea lozoyensis M7I_1326 I 0.000
MAC_04099 Metarhizium acridum MAC_04099 I 0.000
MAJ_06385 Metarhizium majus MAJ_06385 I 0.000
MAM_04656 Metarhizium album MAM_04656 I 0.000
MANI_003859 Metarhizium anisopliae MANI_003859 I 0.000
MAPG_08138 Magnaporthe poae MAPG_08138 I 0.000
MBM_01938 Marssonina brunnea MBM_01938 I 0.000
MBR_05419 Metarhizium brunneum MBR_05419 I 0.000
MCYG_05889 Microsporum canis MCYG_05889 I 0.000
MCYG_05889 Arthroderma otae MCYG_05889 I 0.000
MGG_05240 Magnaporthe oryzae MGG_05240 I 0.000
MGU_05479 Metarhizium guizhouense MGU_05479 I 0.000
MGYG_06082 Microsporum gypseum MGYG_06082 I 0.000
MPH_09871 Macrophomina phaseolina MPH_09871 I 0.000
MYCTH_50303 Myceliophthora thermophila MYCTH_50303 I 0.000
NCU07834 Neurospora crassa NCU07834 D 0.000
NechaG81864 Fusarium solani NechaG81864 I 0.000
NEUTE1DRAFT_80911 Neurospora tetrasperma NEUTE1DRAFT_80911 I 0.000
OCS_06863 Ophiocordyceps sinensis OCS_06863 I 0.000
OIDMADRAFT_26900 Oidiodendron maius OIDMADRAFT_26900 I 0.000
PAAG_06795 Paracoccidioides sp lutzii PAAG_06795 I 0.000
PABG_01081 Paracoccidioides brasiliensis PABG_01081 I 0.000
PDE_05251 Penicillium oxalicum PDE_05251 I 0.000
PFICI_05808 Pestalotiopsis fici PFICI_05808 I 0.000
PMAA_055660 Penicillium marneffei PMAA_055660 I 0.000
PMAA_055660 Talaromyces marneffei PMAA_055660 I 0.000
PTRG_10693 Pyrenophora triticirepentis PTRG_10693 I 0.000
PTT_08996 Pyrenophora teres PTT_08996 I 0.000
PVAR5_1965 Byssochlamys spectabilis PVAR5_1965 I 0.000
S40285_00496 Stachybotrys chlorohalonata S40285_00496 I 0.000
SAPIO_CDS7771 Scedosporium apiospermum SAPIO_CDS7771 I 0.000
SBOR_1213 Sclerotinia borealis SBOR_1213 I 0.000
SETTUDRAFT_41277 Setosphaeria turcica SETTUDRAFT_41277 I 0.000
SMAC_02112 Sordaria macrospora SMAC_02112 I 0.000
SNOG_09800 Stagonospora nodorum SNOG_09800 I 0.000
SNOG_09800 Phaeosphaeria nodorum SNOG_09800 I 0.000
SPBR_00477 Sporothrix brasiliensis SPBR_00477 I 0.000
SS1G_03205 Sclerotinia sclerotiorum SS1G_03205 I 0.000
TEQG_06366 Trichophyton equinum TEQG_06366 I 0.000
TSTA_016710 Talaromyces stipitatus TSTA_016710 I 0.000
UCRNP2_4750 Neofusicoccum parvum UCRNP2_4750 I 0.000
UV8b_3847 Ustilaginoidea virens UV8b_3847 I 0.000
V499_03771 Pseudogymnoascus pannorum V499_03771 I 0.000
VDAG_10303 Verticillium dahliae VDAG_10303 I 0.000
VHEMI02782 Torrubiella hemipterigena VHEMI02782 I 0.000
X797_009564 Metarhizium robertsii X797_009564 I 0.000