CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LCUP007749
(
Lucilia cuprina
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
LCUP007749
T229920_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
H2.0
M06489_2.00
Drosophila melanogaster
WTWATDA
THATWAW
B1H
Mathelier et al.(2014)
MA0448.1
0.867
1.000
H2.0
M06250_2.00
Drosophila melanogaster
TWWWWDA
THAWWWA
B1H
Zhu et al.(2011)
H2.0_Cell_FBgn0001170
0.867
1.000
H2.0
M06251_2.00
Drosophila melanogaster
WTWATTRN
NYAATWAW
B1H
Zhu et al.(2011)
H2.0_SOLEXA_FBgn0001170
0.867
1.000
Hlx
M00485_2.00
Mus musculus
NNNAWND
HNWTNNN
PBM
Berger et al.(2008)
Hlx1_2350
0.847
0.842
Dbx
M02128_2.00
Drosophila melanogaster
WTTAATTA
TAATTAAW
PBM
Weirauch et al.(2014)
pTH6051
0.749
0.737
Dbx
M06550_2.00
Drosophila melanogaster
TTWATKA
TMATWAA
B1H
Mathelier et al.(2014)
MA0174.1
0.749
0.737
Dbx1
M00451_2.00
Mus musculus
WTTAATTA
TAATTAAW
PBM
Berger et al.(2008)
Dbx1_3486
0.732
0.684
Dbx2
M00499_2.00
Mus musculus
NNDTNNN
NNNAHNN
PBM
Berger et al.(2008)
Dbx2_3487
0.712
0.667
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LCUP007749-PA
Homeodomain
152
208
SWSRAVFSNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRH
Links
Other
Homeodomain
family TFs
Other
Lucilia cuprina
TFs
264 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy