CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LCUP016944
(
Lucilia cuprina
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
LCUP016944
T229964_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
schlank
M06543_2.00
Drosophila melanogaster
YTRGTRG
CYACYAR
B1H
Mathelier et al.(2014)
MA0193.1
0.674
0.732
schlank
M06362_2.00
Drosophila melanogaster
AWBYTRGTRG
CYACYARVWT
B1H
Zhu et al.(2011)
Lag1_Cell_FBgn0040918
0.674
0.732
schlank
M06363_2.00
Drosophila melanogaster
DWWHTRGTRG
CYACYADWWH
B1H
Zhu et al.(2011)
Lag1_SOLEXA_FBgn0040918
0.674
0.732
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LCUP016944-PA
Homeodomain
75
130
RSTRSKKAPNIPLLEKAYEKSIRLDHKKVVSLSKQLDLTERQIERWWRLRRAQDKP
Links
Other
Homeodomain
family TFs
Other
Lucilia cuprina
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARB_02964
Arthroderma benhamiae
ARB_02964
N
CIMG_01261
Coccidioides immitis
CIMG_01261
N
H102_07396
Trichophyton rubrum
H102_07396
N
H105_07426
Trichophyton soudanense
H105_07426
N
MCYG_00476
Microsporum canis
MCYG_00476
N
MCYG_00476
Arthroderma otae
MCYG_00476
N
MGYG_01483
Microsporum gypseum
MGYG_01483
N
PVAR5_6204
Byssochlamys spectabilis
PVAR5_6204
N
TEQG_03698
Trichophyton equinum
TEQG_03698
N
TESG_04244
Trichophyton tonsurans
TESG_04244
N
TRV_01220
Trichophyton verrucosum
TRV_01220
N