LDEC008640 (Leptinotarsa decemlineata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 LDEC008640 T230012_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.753 0.478
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.753 0.478
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.753 0.478
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.753 0.478
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.753 0.478
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.753 0.478
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.753 0.478
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.753 0.478
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.753 0.478
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.662 0.239
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.662 0.239
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.662 0.239
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC008640-PA Homeodomain 49 94

Links

Other Homeodomain family TFs
Other Leptinotarsa decemlineata TFs

1222 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG014093.1 Alligator sinensis Alligator_sinensis_CCG014093.1 N 0.000
Cmyd_10014495 Chelonia mydas Cmyd_10014495 N 0.000
ENSAMEG00000019915 Ailuropoda melanoleuca ENSAMEG00000019915 N 0.000
ASCL3 Bos taurus ENSBTAG00000032339 N 0.000
ASCL3 Canis familiaris ENSCAFG00000024403 N 0.000
ASCL3 Callithrix jacchus ENSCJAG00000011693 N 0.000
ASCL3 Cavia porcellus ENSCPOG00000011108 N 0.000
ENSCSAG00000019329 Chlorocebus sabaeus ENSCSAG00000019329 N 0.000
ASCL3 Dasypus novemcinctus ENSDNOG00000025092 N 0.000
ENSDORG00000013306 Dipodomys ordii ENSDORG00000013306 N 0.000
ASCL3 Equus caballus ENSECAG00000008707 N 0.000
ASCL3 Felis catus ENSFCAG00000008414 N 0.000
ASCL3 Homo sapiens ENSG00000176009 N 0.000
ASCL3 Loxodonta africana ENSLAFG00000010672 N 0.000
ENSMEUG00000016296 Macropus eugenii ENSMEUG00000016296 N 0.000
ENSMICG00000005296 Microcebus murinus ENSMICG00000005296 N 0.000
ASCL3 Myotis lucifugus ENSMLUG00000014718 N 0.000
ASCL3 Macaca mulatta ENSMMUG00000001997 N 0.000
ASCL3 Monodelphis domestica ENSMODG00000024589 N 0.000
Ascl3 Mus musculus ENSMUSG00000035951 N 0.000
ENSNLEG00000017548 Nomascus leucogenys ENSNLEG00000017548 N 0.000
ENSOARG00000017152 Ovis aries ENSOARG00000017152 N 0.000
ASCL3 Oryctolagus cuniculus ENSOCUG00000011310 N 0.000
ASCL3 Otolemur garnettii ENSOGAG00000014012 N 0.000
ASCL3 Ochotona princeps ENSOPRG00000004802 N 0.000
ENSP00000318846 Macaca fascicularis ENSP00000318846 N 0.000
ENSP00000318846-D1 Bos grunniens ENSP00000318846-D1 N 0.000
ENSPANG00000002749 Papio anubis ENSPANG00000002749 N 0.000
ASCL3 Procavia capensis ENSPCAG00000014597 N 0.000
ENSPPYG00000003501 Pongo abelii ENSPPYG00000003501 N 0.000
ASCL3 Pan troglodytes ENSPTRG00000003339 N 0.000
ASCL3 Pteropus vampyrus ENSPVAG00000000414 N 0.000
ASCL3 Sorex araneus ENSSARG00000005318 N 0.000
ENSSHAG00000018108 Sarcophilus harrisii ENSSHAG00000018108 N 0.000
ENSSTOG00000002499 Ictidomys tridecemlineatus ENSSTOG00000002499 N 0.000
ASCL3 Tupaia belangeri ENSTBEG00000004929 N 0.000
ENSTSYG00000006425 Tarsius syrichta ENSTSYG00000006425 N 0.000
Myotis_brandtii_ASCL3_10026847 Myotis brandtii Myotis_brandtii_ASCL3_10026847 N 0.000