Sjc_0051960 (Schistosoma japonicum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Sjc_0051960 T230162_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.688 0.500
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.688 0.500
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.688 0.500
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.688 0.500
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.688 0.500
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.688 0.500
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.688 0.500
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.688 0.500
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.688 0.500
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.675 0.417
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.675 0.417
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.675 0.417
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CPRT0000004896 Homeodomain 205 228

Links

Other Homeodomain family TFs
Other Schistosoma japonicum TFs

1208 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
15796_YLR278C Saccharomyces paradoxus 15796_YLR278C I 0.000
16783_Multiple Saccharomyces bayanus 16783_Multiple I 0.000
23508_YLR278C Saccharomyces mikatae 23508_YLR278C I 0.000
AACERI_AaceriAGR280C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGR280C I 0.000
AGOS_AGR280C Ashbya gossypii AGOS_AGR280C I 0.000
BN7_1291 Wickerhamomyces ciferrii BN7_1291 N 0.000
CAGL0G09757g Candida glabrata CAGL0G09757g I 0.000
Ecym_3112 Eremothecium cymbalariae Ecym_3112 I 0.000
KAFR_0A04940 Kazachstania africana KAFR_0A04940 I 0.000
KLLA0_C04620g Kluyveromyces lactis KLLA0_C04620g N 0.000
KLTH0G15180g Lachancea thermotolerans KLTH0G15180g I 0.000
KNAG_0F03040 Kazachstania naganishii KNAG_0F03040 I 0.000
KNAG_0M00970 Kazachstania naganishii KNAG_0M00970 I 0.000
Kpol_345p3 Vanderwaltozyma polyspora Kpol_345p3 I 0.000
LALA0_S10e04918g Lachancea lanzarotensis LALA0_S10e04918g I 0.000
NCAS_0F00370 Naumovozyma castellii NCAS_0F00370 I 0.000
NDAI_0D02730 Naumovozyma dairenensis NDAI_0D02730 I 0.000
SAKL0A08074g Lachancea kluyveri SAKL0A08074g I 0.000
Scas_Contig526.3 Saccharomyces castellii Scas_Contig526.3 I 0.000
SU7_2306 Saccharomyces arboricola SU7_2306 I 0.000
TBLA_0E01110 Tetrapisispora blattae TBLA_0E01110 I 0.000
TDEL_0G03970 Torulaspora delbrueckii TDEL_0G03970 N 0.000
TPHA_0F02630 Tetrapisispora phaffii TPHA_0F02630 I 0.000
YLR278C Saccharomyces cerevisiae YLR278C D 0.000
ZBAI_03663 Zygosaccharomyces bailii ZBAI_03663 I 0.000
ZBAI_09347 Zygosaccharomyces bailii ZBAI_09347 I 0.000
ZYRO0D14432g Zygosaccharomyces rouxii ZYRO0D14432g I 0.000