SMU15032137 (Schmidtea mediterranea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SMU15032137 T230297_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Pbx1
M00513_2.00 		Mus musculus
NNDKANNNN
NNNNTMHNN		 PBM
Berger et al.(2008)
Pbx1_3203 		0.862 0.930
PBX1
M05362_2.00 		Homo sapiens
NTGATKGAYR
YRTCMATCAN		 SELEX
Yin et al.(2017)
PBX1_eDBD_HT-SELEX 		0.862 0.930
PBX1
M05364_2.00 		Homo sapiens
DTGMTKGRYN
NRYCMAKCAH		 SELEX
Yin et al.(2017)
PBX1_FL_HT-SELEX 		0.862 0.930
PBX1
M02685_2.00 		Homo sapiens
WWTGATTGATND
HNATCAATCAWW		 SELEX
Mathelier et al.(2014)
MA0070.1 		0.862 0.930
PBX2
M08134_2.00 		Homo sapiens
NWGAKTGACABN
NVTGTCAMTCWN		 ChIP-seq
Mathelier et al.(2014)
MA1113.1 		0.862 0.930
PBX1
M09164_2.00 		Homo sapiens
DGABTGRCRG
CYGYCAVTCH		 Misc
Kulakovskiy et al.(2013)
PBX1_HUMAN.H11MO.0.A 		0.862 0.930
PBX2
M09165_2.00 		Homo sapiens
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_HUMAN.H11MO.0.C 		0.862 0.930
Pbx2
M09199_2.00 		Mus musculus
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_MOUSE.H11MO.0.C 		0.862 0.930
PBX1
M09561_2.00 		Homo sapiens
TGABTGACAGSC
GSCTGTCAVTCA		 Misc
Heinz et al.(2010)
MCF7-PBX1_GSE28007 		0.862 0.930
PBX1
M10748_2.00 		Homo sapiens
WTKATTRDT
AHYAATMAW		 Transfac
Matys et al.(2006)
V$PBX1_01 		0.862 0.930
PBX1
M10749_2.00 		Homo sapiens
DNHTTGATTGATKDB
VHMATCAATCAADNH		 Transfac
Matys et al.(2006)
V$PBX1_02 		0.862 0.930
PBX1
M10750_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_03 		0.862 0.930
PBX1
M10751_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_05 		0.862 0.930
PBX1
M10752_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_10 		0.862 0.930
PBX1
M10753_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_Q3 		0.862 0.930
PBX1
M05363_2.00 		Homo sapiens
DTGAKKGAYG
CRTCMMTCAH		 SELEX
Yin et al.(2017)
PBX1_eDBD_Methyl-HT-SELEX 		0.862 0.930
PBX1
M05365_2.00 		Homo sapiens
MRTCAATCMH
DKGATTGAYK		 SELEX
Yin et al.(2017)
PBX1_FL_Methyl-HT-SELEX 		0.862 0.930
pbx4
M02110_2.00 		Tetraodon nigroviridis
TTGAYGDV
BHCRTCAA		 PBM
Weirauch et al.(2014)
pTH6425 		0.862 0.912
Pbx3
M09205_2.00 		Mus musculus
BBBTGATTGRYNDN
NHNRYCAATCAVVV		 Misc
Kulakovskiy et al.(2013)
PBX3_MOUSE.H11MO.0.A 		0.860 0.930
exd
M06487_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Mathelier et al.(2014)
MA0222.1 		0.817 0.912
exd
M06243_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Zhu et al.(2011)
Exd_Cell_FBgn0000611 		0.817 0.912
exd
M06244_2.00 		Drosophila melanogaster
NWRNWYNAAA
TTTNRWNYWN		 B1H
Zhu et al.(2011)
exd_FlyReg_FBgn0000611 		0.817 0.912
exd
M06245_2.00 		Drosophila melanogaster
NDTGAYRW
WYRTCAHN		 B1H
Zhu et al.(2011)
exd_SOLEXA_2_FBgn0000611 		0.817 0.912
exd
M06246_2.00 		Drosophila melanogaster
NNDTGAYR
YRTCAHNN		 B1H
Zhu et al.(2011)
Exd_SOLEXA_FBgn0000611 		0.817 0.912
PBX4
M00277_2.00 		Homo sapiens
NNDDWHDNNN
NNNHDWHHNN		 PBM
Barrera et al.(2016)
PBX4_REF 		0.815 0.860
PBX4
M10649_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX4_01 		0.815 0.860
CBG10835
M01243_2.00 		Caenorhabditis briggsae
NNTKAYDNN
NNHRTMANN		 PBM
Lambert et al.(2019)
pTH11444 		0.691 0.579
PBX4
M00276_2.00 		Homo sapiens
NYTAATTADNN
NNHTAATTARN		 PBM
Barrera et al.(2016)
PBX4_R215Q 		0.677 0.842
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15032137 Homeodomain 246 305

Links

Other Homeodomain family TFs
Other Schmidtea mediterranea TFs

435 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
10452_Multiple Saccharomyces mikatae 10452_Multiple I
10716_YIL130W Saccharomyces paradoxus 10716_YIL130W I
11848_Multiple Saccharomyces bayanus 11848_Multiple I
A1O1_01019 Capronia coronata A1O1_01019 I
A1O3_07535 Capronia epimyces A1O3_07535 I
A1O3_10373 Capronia epimyces A1O3_10373 I
A1O5_04202 Cladophialophora psammophila A1O5_04202 I
A1O7_00074 Cladophialophora yegresii A1O7_00074 I
A1O9_05871 Exophiala aquamarina A1O9_05871 N
AACERI_AaceriAER370W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAER370W I
AB00291.1 Alternaria brassicicola AB00291.1 I
AB03633.1 Alternaria brassicicola AB03633.1 I
ACRE_068200 Acremonium chrysogenum ACRE_068200 I
AGOS_AER370W Ashbya gossypii AGOS_AER370W I
AOL_s00076g698 Arthrobotrys oligospora AOL_s00076g698 I
AOL_s00086g1 Arthrobotrys oligospora AOL_s00086g1 I
ARB_07830 Arthroderma benhamiae ARB_07830 N
AUEXF2481DRAFT_64674 Aureobasidium subglaciale AUEXF2481DRAFT_64674 I
BAUCODRAFT_197012 Baudoinia compniacensis BAUCODRAFT_197012 I
BBA_03269 Beauveria bassiana BBA_03269 N
Bcin03g02160 Botrytis cinerea Bcin03g02160 I
Bcin10g03880 Botrytis cinerea Bcin10g03880 I
BDDG_02817 Blastomyces dermatitidis BDDG_02817 I
BGHDH14_bgh00681 Blumeria graminis BGHDH14_bgh00681 I
BGHDH14_bgh05670 Blumeria graminis BGHDH14_bgh05670 I
BGHDH14_bghG002046000001001 Blumeria graminis BGHDH14_bghG002046000001001 I
BN7_630 Wickerhamomyces ciferrii BN7_630 I
ACLA_039870 Aspergillus clavatus CADACLAG00003667 I
CADAFLAG00002428 Aspergillus flavus CADAFLAG00002428 I
AFUA_3G11990 Aspergillus fumigatus CADAFUAG00005328 I
CADANGAG00002302 Aspergillus niger CADANGAG00002302 I
ANIA_02852 Aspergillus nidulans CADANIAG00010238 I
CADAORAG00001356 Aspergillus oryzae CADAORAG00001356 I
ATEG_04743 Aspergillus terreus CADATEAG00006676 I
NFIA_065310 Neosartorya fischeri CADNFIAG00006112 I
CAGL0G08844g Candida glabrata CAGL0G08844g I
CFIO01_13705 Colletotrichum fioriniae CFIO01_13705 I
CGGC5_1101 Colletotrichum gloeosporioides CGGC5_1101 I
CH063_05582 Colletotrichum higginsianum CH063_05582 I
CIMG_03723 Coccidioides immitis CIMG_03723 I
Cob_06492 Colletotrichum orbiculare Cob_06492 I
COCC4DRAFT_160202 Bipolaris maydis COCC4DRAFT_160202 I
COCC4DRAFT_207933 Bipolaris maydis COCC4DRAFT_207933 I
COCC4DRAFT_47497 Bipolaris maydis COCC4DRAFT_47497 I
COCCADRAFT_3273 Bipolaris zeicola COCCADRAFT_3273 I
COCCADRAFT_34914 Bipolaris zeicola COCCADRAFT_34914 I
COCCADRAFT_94387 Bipolaris zeicola COCCADRAFT_94387 I
COCMIDRAFT_23407 Bipolaris oryzae COCMIDRAFT_23407 I
COCMIDRAFT_8258 Bipolaris oryzae COCMIDRAFT_8258 I
COCMIDRAFT_84872 Bipolaris oryzae COCMIDRAFT_84872 I
COCSADRAFT_150882 Bipolaris sorokiniana COCSADRAFT_150882 I
COCSADRAFT_174716 Bipolaris sorokiniana COCSADRAFT_174716 I
COCSADRAFT_243527 Bipolaris sorokiniana COCSADRAFT_243527 I
COCVIDRAFT_103972 Bipolaris victoriae COCVIDRAFT_103972 I
COCVIDRAFT_29056 Bipolaris victoriae COCVIDRAFT_29056 I
COCVIDRAFT_34294 Bipolaris victoriae COCVIDRAFT_34294 I
CPC735_005650 Coccidioides posadasii CPC735_005650 I
CPUR_06386 Claviceps purpurea CPUR_06386 I
CSUB01_04391 Colletotrichum sublineola CSUB01_04391 I
DOTSEDRAFT_68949 Dothistroma septosporum DOTSEDRAFT_68949 I
DRE_01382 Drechslerella stenobrocha DRE_01382 I
Ecym_5397 Eremothecium cymbalariae Ecym_5397 I
estExt_Genewise1.C_11263 Cryphonectria parasitica estExt_Genewise1.C_11263 I
estExt_Genewise1.C_350071 Cochliobolus heterostrophus C5 estExt_Genewise1.C_350071 I
estExt_Genewise1Plus.C_11405 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_11405 I
estExt_Genewise1Plus.C_11533 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_11533 I
estExt_Genewise1Plus.C_12924 Cryphonectria parasitica estExt_Genewise1Plus.C_12924 I
estExt_Genewise1Plus.C_51047 Neurospora discreta estExt_Genewise1Plus.C_51047 I
estExt_Genewise1Plus.C_chr_11749 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_11749 I
estExt_Genewise1Plus.C_sca_20_chr6_4_00971 Nectria haematococca estExt_Genewise1Plus.C_sca_20_chr6_4_00971 I
EURHEDRAFT_457145 Aspergillus ruber EURHEDRAFT_457145 I
e_gw1.1.3784.1 Mycosphaerella fijiensis e_gw1.1.3784.1 I
F503_04993 Ophiostoma piceae uamh F503_04993 I
FFUJ_03061 Fusarium fujikuroi FFUJ_03061 I
FFUJ_07921 Fusarium fujikuroi FFUJ_07921 I
fgenesh1_pg.00866_#_460 Aspergillus carbonarius fgenesh1_pg.00866_#_460 I
fgenesh1_pm.sca_6_chr9_2_0000181 Nectria haematococca fgenesh1_pm.sca_6_chr9_2_0000181 I
fgeneshMC_pg.2_#_284 Mucor circinelloides fgeneshMC_pg.2_#_284 I
FGRRES_02531 Fusarium graminearum FGRRES_02531 I
FGRRES_06810 Fusarium graminearum FGRRES_06810 I
FOXG_02014 Fusarium oxysporum FOXG_02014 I
FOXG_10560 Fusarium oxysporum FOXG_10560 I
FPSE_08652 Fusarium pseudograminearum FPSE_08652 I
FPSE_11855 Fusarium pseudograminearum FPSE_11855 I
FVEG_05176 Fusarium verticillioides FVEG_05176 I
FVEG_09208 Fusarium verticillioides FVEG_09208 I
G647_00084 Cladophialophora carrionii G647_00084 I
GLRG_02281 Colletotrichum graminicola GLRG_02281 I
GMDG_00261 Pseudogymnoascus destructans GMDG_00261 I
GMDG_03842 Pseudogymnoascus destructans GMDG_03842 I
GSTUM_00004065001 Tuber melanosporum GSTUM_00004065001 I
GSTUM_00005693001 Tuber melanosporum GSTUM_00005693001 I
H072_1723 Dactylellina haptotyla H072_1723 I
H101_06009 Trichophyton interdigitale H101_06009 I
H102_08256 Trichophyton rubrum H102_08256 I
H105_08284 Trichophyton soudanense H105_08284 I
HCBG_06695 Histoplasma capsulatum HCBG_06695 I
HMPREF1120_00700 Exophiala dermatitidis HMPREF1120_00700 I
HMPREF1541_07771 Cyphellophora europaea HMPREF1541_07771 I
HMPREF1624_02869 Sporothrix schenckii HMPREF1624_02869 I
KAFR_0J01710 Kazachstania africana KAFR_0J01710 I
KLLA0_F04609g Kluyveromyces lactis KLLA0_F04609g I
KLTH0G09108g Lachancea thermotolerans KLTH0G09108g I
KLTH0G09108g Kluyveromyces thermotolerans KLTH0G09108g I
KNAG_0E01760 Kazachstania naganishii KNAG_0E01760 I
Kpol_1039p11 Vanderwaltozyma polyspora Kpol_1039p11 I
KUCA_T00002124001 Kuraishia capsulata KUCA_T00002124001 I
Kwal_4754 Kluyveromyces waltii Kwal_4754 I
LALA0_S04e08614g Lachancea lanzarotensis LALA0_S04e08614g I
LEMA_P017080.1 Leptosphaeria maculans LEMA_P017080.1 I
LEMA_P018460.1 Leptosphaeria maculans LEMA_P018460.1 I
LEMA_P079800.1 Leptosphaeria maculans LEMA_P079800.1 I
M437DRAFT_43351 Aureobasidium melanogenum M437DRAFT_43351 I
M438DRAFT_374425 Aureobasidium pullulans M438DRAFT_374425 I
MAC_04093 Metarhizium acridum MAC_04093 I
MAJ_06390 Metarhizium majus MAJ_06390 I
MBM_01220 Marssonina brunnea MBM_01220 I
MBM_08201 Marssonina brunnea MBM_08201 I
MBR_05424 Metarhizium brunneum MBR_05424 I
MCYG_01011 Microsporum canis MCYG_01011 I
MCYG_01011 Arthroderma otae MCYG_01011 I
MGG_05683 Magnaporthe oryzae MGG_05683 I
MGG_09118 Magnaporthe oryzae MGG_09118 N
MGU_05483 Metarhizium guizhouense MGU_05483 N
MGYG_00975 Microsporum gypseum MGYG_00975 I
Moror_2492 Moniliophthora roreri Moror_2492 I
MPH_05411 Macrophomina phaseolina MPH_05411 I
MPH_05518 Macrophomina phaseolina MPH_05518 I
Mycgr3G66057 Zymoseptoria tritici Mycgr3G66057 I
MYCTH_2301134 Myceliophthora thermophila MYCTH_2301134 I
NCAS_0B06550 Naumovozyma castellii NCAS_0B06550 I
NCU00155 Neurospora crassa NCU00155 D
NDAI_0B03850 Naumovozyma dairenensis NDAI_0B03850 I
NechaG70404 Fusarium solani NechaG70404 I
NechaG96223 Fusarium solani NechaG96223 I
NEUTE1DRAFT_81814 Neurospora tetrasperma NEUTE1DRAFT_81814 I
OCS_01648 Ophiocordyceps sinensis OCS_01648 I
OIDMADRAFT_105646 Oidiodendron maius OIDMADRAFT_105646 I
OIDMADRAFT_111796 Oidiodendron maius OIDMADRAFT_111796 I
PABG_02299 Paracoccidioides brasiliensis PABG_02299 I
PAS_chr4_0203 Komagataella pastoris PAS_chr4_0203 I
Pc18g00400 Penicillium chrysogenum Pc18g00400 I
PCH_Pc18g00400 Penicillium rubens PCH_Pc18g00400 I
PDE_05166 Penicillium oxalicum PDE_05166 I
PDIP_27070 Penicillium digitatum PDIP_27070 I
PEX1_059620 Penicillium expansum PEX1_059620 I
PFICI_10867 Pestalotiopsis fici PFICI_10867 I
PFICI_12992 Pestalotiopsis fici PFICI_12992 I
PGUG_03208 Candida guilliermondii PGUG_03208 I
PGUG_03208 Meyerozyma guilliermondii PGUG_03208 I
PITC_065240 Penicillium italicum PITC_065240 I
PMAA_023940 Talaromyces marneffei PMAA_023940 I
PMAA_023940 Penicillium marneffei PMAA_023940 I
PODANS_7_5860 Podospora anserina PODANS_7_5860 N
PTRG_00141 Pyrenophora triticirepentis PTRG_00141 I
PTRG_09927 Pyrenophora triticirepentis PTRG_09927 I
PTT_04846 Pyrenophora teres PTT_04846 I
PTT_11750 Pyrenophora teres PTT_11750 I
PTT_18497 Pyrenophora teres PTT_18497 I
PV05_03147 Exophiala xenobiotica PV05_03147 I
PV05_10933 Exophiala xenobiotica PV05_10933 I
PV06_03636 Exophiala oligosperma PV06_03636 I
PV06_08134 Exophiala oligosperma PV06_08134 I
PV07_10738 Cladophialophora immunda PV07_10738 I
PV08_06047 Exophiala spinifera PV08_06047 I
PV08_06945 Exophiala spinifera PV08_06945 I
PV09_02833 Verruconis gallopava PV09_02833 I
PV09_07264 Verruconis gallopava PV09_07264 I
PV10_09014 Exophiala mesophila PV10_09014 I
PV11_05223 Exophiala sideris PV11_05223 I
PV11_07819 Exophiala sideris PV11_07819 I
PVAR5_3046 Byssochlamys spectabilis PVAR5_3046 I
S40285_00491 Stachybotrys chlorohalonata S40285_00491 I
S40285_01567 Stachybotrys chlorohalonata S40285_01567 I
S40288_00263 Stachybotrys chartarum S40288_00263 I
S40288_02961 Stachybotrys chartarum S40288_02961 I
SAKL0E08998g Lachancea kluyveri SAKL0E08998g I
SBOR_6586 Sclerotinia borealis SBOR_6586 I
Scas_Contig662.8 Saccharomyces castellii Scas_Contig662.8 I
SCHCODRAFT_108853 Schizophyllum commune SCHCODRAFT_108853 I
SEPMUDRAFT_122857 Sphaerulina musiva SEPMUDRAFT_122857 I
SETTUDRAFT_166989 Setosphaeria turcica SETTUDRAFT_166989 I
SETTUDRAFT_167119 Setosphaeria turcica SETTUDRAFT_167119 I
SETTUDRAFT_182790 Setosphaeria turcica SETTUDRAFT_182790 I
SNOG_10771 Stagonospora nodorum SNOG_10771 I
SNOG_10771 Phaeosphaeria nodorum SNOG_10771 I
SNOG_14661 Stagonospora nodorum SNOG_14661 I
SNOG_14662 Phaeosphaeria nodorum SNOG_14662 I
SNOG_14714 Stagonospora nodorum SNOG_14714 I
SNOG_14714 Phaeosphaeria nodorum SNOG_14714 I
SPBR_02224 Sporothrix brasiliensis SPBR_02224 I
SU7_1579 Saccharomyces arboricola SU7_1579 I
TBLA_0G02610 Tetrapisispora blattae TBLA_0G02610 I
TDEL_0C04480 Torulaspora delbrueckii TDEL_0C04480 I
TEQG_01038 Trichophyton equinum TEQG_01038 I
TESG_04568 Trichophyton tonsurans TESG_04568 I
THITE_57956 Thielavia terrestris THITE_57956 I
TRIATDRAFT_145432 Trichoderma atroviride TRIATDRAFT_145432 I
TRIATDRAFT_295508 Trichoderma atroviride TRIATDRAFT_295508 I
TRIREDRAFT_2148 Trichoderma reesei TRIREDRAFT_2148 I
TRIREDRAFT_48281 Trichoderma reesei TRIREDRAFT_48281 I
TRIVIDRAFT_33603 Trichoderma virens TRIVIDRAFT_33603 I
TRIVIDRAFT_82975 Trichoderma virens TRIVIDRAFT_82975 I
TRV_01300 Trichophyton verrucosum TRV_01300 N
TSTA_032370 Talaromyces stipitatus TSTA_032370 I
U727_00433850521 Penicillium solitum U727_00433850521 I
U727_0043393211 Penicillium solitum U727_0043393211 I
UCRNP2_4088 Neofusicoccum parvum UCRNP2_4088 I
UCRNP2_488 Neofusicoccum parvum UCRNP2_488 I
UCRPA7_6910 Togninia minima UCRPA7_6910 I
UREG_07542 Uncinocarpus reesii UREG_07542 I
VDAG_03724 Verticillium dahliae VDAG_03724 I
VHEMI01078 Torrubiella hemipterigena VHEMI01078 I
VHEMI02852 Torrubiella hemipterigena VHEMI02852 I
W97_02588 Coniosporium apollinis W97_02588 I
X797_009558 Metarhizium robertsii X797_009558 I
XP_002493608.1 Pichia pastoris XP_002493608.1 I
YALI0_C22990g Yarrowia lipolytica YALI0_C22990g I
ASG1 Saccharomyces cerevisiae YIL130W D
Z517_08868 Fonsecaea pedrosoi Z517_08868 I
Z518_02994 Rhinocladiella mackenziei Z518_02994 I
Z518_07968 Rhinocladiella mackenziei Z518_07968 I
Z519_03481 Cladophialophora bantiana Z519_03481 I