CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgeneshTM_pg.2_#_419
(
Tremella mesenterica
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
fgeneshTM_pg.2_#_419
T230867_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CNG03450
M02066_2.00
Cryptococcus neoformans
NTTAATWDN
NHWATTAAN
PBM
Weirauch et al.(2014)
pTH5724
0.772
0.768
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgeneshTM_pg.2_#_419
Homeodomain
264
319
KAPRKRADDSQVALLLEVFERTSYPTTEERDHLARRLGMTSRSVQIWFQNRRRAVK
Links
Other
Homeodomain
family TFs
Other
Tremella mesenterica
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BN946_scf184983.g13
Trametes cinnabarina
BN946_scf184983.g13
I
0.599
CNG03450
Cryptococcus neoformans
CNG03450
D
0.772
FIBRA_03525
Fibroporia radiculosa
FIBRA_03525
I
0.609
FOMPIDRAFT_1031831
Fomitopsis pinicola
FOMPIDRAFT_1031831
I
0.609
GLOINDRAFT_346743
Rhizophagus irregularis
GLOINDRAFT_346743
I
0.599
gw1.10.371.1
Mucor circinelloides
gw1.10.371.1
I
0.633
gw1.16.189.1
Phycomyces blakesleeanus
gw1.16.189.1
I
0.633
gw1.6.914.1
Mucor circinelloides
gw1.6.914.1
I
0.600
L804_03528
Cryptococcus gattii
L804_03528
I
0.772
PHACADRAFT_258345
Phanerochaete carnosa
PHACADRAFT_258345
I
0.599
PHLGIDRAFT_184498
Phlebiopsis gigantea
PHLGIDRAFT_184498
I
0.599
RO3G_04480
Rhizopus oryzae
RO3G_04480
I
0.601
RO3G_14851
Rhizopus oryzae
RO3G_14851
I
0.601
RO3G_16317
Rhizopus oryzae
RO3G_16317
I
0.648