CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Minc16171
(
Meloidogyne incognita
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Minc16171
T230972_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc16171a
Homeodomain
331
384
STVINEMQLTALKREFQVCHYPDVGLQNLLAKKIGLPRDVIGEWFKNERQKARQ
Minc16171a
Homeodomain
393
446
STVINEIQLTALKRKFQADCYPDVRTKNELAKNLGLPAGVIGEWFKNKRQKARE
Minc16171b
Homeodomain
121
174
STVINEMQLTALKREFQVCHYPDVGLQNLLAKKIGLPRDVIGEWFKNERQKARQ
Minc16171b
Homeodomain
183
236
STVINEIQLTALKRKFQADCYPDVRTKNELAKNLGLPAGVIGEWFKNKRQKARE
Links
Other
Homeodomain
family TFs
Other
Meloidogyne incognita
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc05520
Meloidogyne incognita
Minc05520
N
0.626
Minc05588
Meloidogyne incognita
Minc05588
N
0.864