CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACHR009121
(
Anopheles christyi
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
ACHR009121
T231364_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VSX1
M03087_2.00
Homo sapiens
YTAATTAN
NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.762
0.617
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN
NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.762
0.617
VSX1
M04941_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.762
0.617
VSX1
M04944_2.00
Homo sapiens
NTAATTRS
SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.762
0.617
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN
NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.762
0.617
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN
NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.762
0.617
VSX1
M04943_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.762
0.617
VSX1
M04945_2.00
Homo sapiens
NTAATTRG
CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.762
0.617
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN
NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.762
0.617
VAX1
M03168_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.672
0.383
VAX1
M05182_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.672
0.383
VAX1
M05183_2.00
Homo sapiens
BTMATKRN
NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.672
0.383
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACHR009121-PA
Homeodomain
356
402
RRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQEY
Links
Other
Homeodomain
family TFs
Other
Anopheles christyi
TFs
1182 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BXY_1244000
Bursaphelenchus xylophilus
BXY_1244000
N
0.000
Hba_10596
Heterorhabditis bacteriophora
Hba_10596
I
0.000
M407DRAFT_218356
Tulasnella calospora
M407DRAFT_218356
N
0.000
M408DRAFT_217919
Serendipita vermifera
M408DRAFT_217919
N
0.000
OESDEN_23981
Oesophagostomum dentatum
OESDEN_23981
I
0.000
scaffold74-EXSNAP2012.8
Pristionchus exspectatus
scaffold74-EXSNAP2012.8
I
0.000
SVUK_0001874801
Strongylus vulgaris
SVUK_0001874801
I
0.000
SVUK_0001921301
Strongylus vulgaris
SVUK_0001921301
I
0.000