CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGLB013824
(
Biomphalaria glabrata
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
BGLB013824
T232470_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HESX1
M03187_2.00
Homo sapiens
NHTAATTRVH
DBYAATTADN
SELEX
Jolma et al.(2013)
HESX1_1
0.755
0.388
HESX1
M03188_2.00
Homo sapiens
NTAATTRGYAATTAD
HTAATTRCYAATTAN
SELEX
Jolma et al.(2013)
HESX1_2
0.755
0.388
HESX1
M05227_2.00
Homo sapiens
DYAATTRV
BYAATTRH
SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX
0.755
0.388
HESX1
M05228_2.00
Homo sapiens
NYAATTRD
HYAATTRN
SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX
0.755
0.388
NOBOX
M09135_2.00
Homo sapiens
HTAATTRVB
VBYAATTAD
Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C
0.649
0.449
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGLB013824-PA
Homeodomain
5
37
RRPRTAFTSQQLLELERQFKMNKYLSRPKRFEV
BGLB013824-PA
Homeodomain
35
50
FEVKIWFQNRRMKWKR
Links
Other
Homeodomain
family TFs
Other
Biomphalaria glabrata
TFs
148 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Afo_R004000
Aptenodytes forsteri
Afo_R004000
N
0.000
Brh_R011240
Buceros rhinoceros
Brh_R011240
N
0.000
ENSAMEG00000017562
Ailuropoda melanoleuca
ENSAMEG00000017562
N
0.000
ENSAPLG00000007731
Anas platyrhynchos
ENSAPLG00000007731
N
0.000
ZBTB41
Bos taurus
ENSBTAG00000002291
N
0.000
ZBTB41
Canis familiaris
ENSCAFG00000011381
N
0.000
ZBTB41
Callithrix jacchus
ENSCJAG00000004794
N
0.000
ENSCSAG00000013610
Chlorocebus sabaeus
ENSCSAG00000013610
N
0.000
ENSFALG00000002807
Ficedula albicollis
ENSFALG00000002807
N
0.000
ZBTB41
Homo sapiens
ENSG00000177888
N
0.000
zbtb41
Gasterosteus aculeatus
ENSGACG00000016102
N
0.000
ENSGALG00000002305
Gallus gallus
ENSGALG00000002305
N
0.000
ZBTB41
Gorilla gorilla
ENSGGOG00000004843
N
0.000
ENSGMOG00000002344
Gadus morhua
ENSGMOG00000002344
N
0.000
ZBTB41
Loxodonta africana
ENSLAFG00000012902
N
0.000
ZBTB41
Monodelphis domestica
ENSMODG00000012684
N
0.000
Zbtb41
Mus musculus
ENSMUSG00000033964
N
0.000
ENSNLEG00000018056
Nomascus leucogenys
ENSNLEG00000018056
N
0.000
ENSOARG00000015070
Ovis aries
ENSOARG00000015070
N
0.000
ZBTB41
Oryctolagus cuniculus
ENSOCUG00000014765
N
0.000
ZBTB41
Otolemur garnettii
ENSOGAG00000012893
N
0.000
ENSONIG00000010729
Oreochromis niloticus
ENSONIG00000010729
N
0.000
ENSP00000356375
Macaca fascicularis
ENSP00000356375
N
0.000
ENSP00000356375-D1
Bos grunniens
ENSP00000356375-D1
N
0.000
ENSPFOG00000006537
Poecilia formosa
ENSPFOG00000006537
N
0.000
ENSPPYG00000000388
Pongo abelii
ENSPPYG00000000388
N
0.000
ZBTB41
Pan troglodytes
ENSPTRG00000001808
N
0.000
Zbtb41
Rattus norvegicus
ENSRNOG00000011137
N
0.000
ZBTB41
Taeniopygia guttata
ENSTGUG00000004282
N
0.000
zbtb41
Takifugu rubripes
ENSTRUG00000009203
N
0.000
ZBTB41
Tursiops truncatus
ENSTTRG00000008689
N
0.000
ZBTB41
Vicugna pacos
ENSVPAG00000006551
N
0.000
ENSXMAG00000004794
Xiphophorus maculatus
ENSXMAG00000004794
N
0.000
Gfo_R006641
Geospiza fortis
Gfo_R006641
N
0.000
Tal_R010443
Tyto alba
Tal_R010443
N
0.000