ACOC_0000604501 (Angiostrongylus costaricensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 ACOC_0000604501 T232795_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.820 0.875
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.810 0.893
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.810 0.893
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.810 0.893
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.802 0.857
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.802 0.857
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.802 0.857
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.802 0.857
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.802 0.857
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.802 0.857
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.802 0.857
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.802 0.857
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.802 0.857
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.776 0.857
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACOC_0000604501-mRNA-1 Homeodomain 30 88

Links

Other Homeodomain family TFs
Other Angiostrongylus costaricensis TFs

381 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_084480 Acremonium chrysogenum ACRE_084480 I
BBA_00861 Beauveria bassiana BBA_00861 I
Bcin10g03530 Botrytis cinerea Bcin10g03530 I
CCM_05638 Cordyceps militaris CCM_05638 I
CFIO01_10341 Colletotrichum fioriniae CFIO01_10341 I
CGGC5_2292 Colletotrichum gloeosporioides CGGC5_2292 I
CH063_14565 Colletotrichum higginsianum CH063_14565 I
CHGG_07320 Chaetomium globosum CHGG_07320 I
CMQ_6218 Grosmannia clavigera CMQ_6218 I
Cob_10342 Colletotrichum orbiculare Cob_10342 I
CPUR_07356 Claviceps purpurea CPUR_07356 I
CSUB01_07393 Colletotrichum sublineola CSUB01_07393 I
CTHT_0068120 Chaetomium thermophilum CTHT_0068120 N
estExt_Genewise1Plus.C_140773 Mycosphaerella fijiensis estExt_Genewise1Plus.C_140773 I
estExt_Genewise1Plus.C_chr_20926 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_20926 I
estExt_Genewise1Plus.C_sca_14_chr10_3_00150 Nectria haematococca estExt_Genewise1Plus.C_sca_14_chr10_3_00150 I
F503_07473 Ophiostoma piceae uamh F503_07473 I
FFUJ_12164 Fusarium fujikuroi FFUJ_12164 I
fgenesh2_pg.C_scaffold_1000308 Neurospora discreta fgenesh2_pg.C_scaffold_1000308 I
FGRRES_15897 Fusarium graminearum FGRRES_15897 I
FOXG_04283 Fusarium oxysporum FOXG_04283 I
FPSE_09978 Fusarium pseudograminearum FPSE_09978 I
FVEG_07406 Fusarium verticillioides FVEG_07406 I
GGTG_10494 Gaeumannomyces graminis GGTG_10494 I
GLRG_01236 Colletotrichum graminicola GLRG_01236 I
H101_06251 Trichophyton interdigitale H101_06251 I
H102_00463 Trichophyton rubrum H102_00463 I
H105_00452 Trichophyton soudanense H105_00452 I
HMPREF1624_00610 Sporothrix schenckii HMPREF1624_00610 I
M7I_6116 Glarea lozoyensis M7I_6116 I
MAJ_03096 Metarhizium majus MAJ_03096 I
MANI_006126 Metarhizium anisopliae MANI_006126 I
MAPG_09932 Magnaporthe poae MAPG_09932 I
MBM_00232 Marssonina brunnea MBM_00232 I
MBR_08762 Metarhizium brunneum MBR_08762 I
MCYG_00067 Microsporum canis MCYG_00067 I
MCYG_00067 Arthroderma otae MCYG_00067 I
MGG_11764 Magnaporthe oryzae MGG_11764 I
MGYG_07139 Microsporum gypseum MGYG_07139 I
MYCFIDRAFT_210457 Pseudocercospora fijiensis MYCFIDRAFT_210457 I
Mycgr3G68239 Zymoseptoria tritici Mycgr3G68239 I
MYCTH_2302011 Myceliophthora thermophila MYCTH_2302011 I
tah-3 Neurospora crassa NCU03686 D
NechaG72439 Fusarium solani NechaG72439 I
NEUTE1DRAFT_93932 Neurospora tetrasperma NEUTE1DRAFT_93932 I
OIDMADRAFT_38504 Oidiodendron maius OIDMADRAFT_38504 I
PAAG_05307 Paracoccidioides sp lutzii PAAG_05307 I
PABG_06059 Paracoccidioides brasiliensis PABG_06059 I
PODANS_2_3630 Podospora anserina PODANS_2_3630 I
PV07_01284 Cladophialophora immunda PV07_01284 I
S40285_00002 Stachybotrys chlorohalonata S40285_00002 I
S40288_05664 Stachybotrys chartarum S40288_05664 I
SAPIO_CDS0532 Scedosporium apiospermum SAPIO_CDS0532 I
SBOR_2018 Sclerotinia borealis SBOR_2018 I
SEPMUDRAFT_123488 Sphaerulina musiva SEPMUDRAFT_123488 I
SMAC_02549 Sordaria macrospora SMAC_02549 I
SPBR_06805 Sporothrix brasiliensis SPBR_06805 I
SS1G_07003 Sclerotinia sclerotiorum SS1G_07003 I
TESG_03220 Trichophyton tonsurans TESG_03220 I
THITE_2108176 Thielavia terrestris THITE_2108176 I
TRIATDRAFT_133633 Trichoderma atroviride TRIATDRAFT_133633 I
TRIREDRAFT_22925 Trichoderma reesei TRIREDRAFT_22925 I
TRIVIDRAFT_90960 Trichoderma virens TRIVIDRAFT_90960 I
UCREL1_5463 Eutypa lata UCREL1_5463 N
UV8b_6280 Ustilaginoidea virens UV8b_6280 I
VDBG_09426 Verticillium alfalfae VDBG_09426 I
VDBG_09426 Verticillium albo atrum VDBG_09426 I
VHEMI02535 Torrubiella hemipterigena VHEMI02535 I
X797_003001 Metarhizium robertsii X797_003001 I