ACOC_0001076001 (Angiostrongylus costaricensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 ACOC_0001076001 T232813_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.789 0.511
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.789 0.511
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.789 0.511
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.789 0.511
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.789 0.511
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.789 0.511
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.789 0.511
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.789 0.511
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.789 0.511
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.747 0.356
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.747 0.356
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.747 0.356
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACOC_0001076001-mRNA-1 Homeodomain 8 52

Links

Other Homeodomain family TFs
Other Angiostrongylus costaricensis TFs

1250 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_081730 Acremonium chrysogenum ACRE_081730 N 0.000
Bcin13g02910 Botrytis cinerea Bcin13g02910 N 0.000
BGHDH14_bgh00899 Blumeria graminis BGHDH14_bgh00899 N 0.000
CCM_03073 Cordyceps militaris CCM_03073 N 0.000
CCM_04463 Cordyceps militaris CCM_04463 N 0.000
CFIO01_03461 Colletotrichum fioriniae CFIO01_03461 N 0.000
CH063_13085 Colletotrichum higginsianum CH063_13085 N 0.000
Cob_10938 Colletotrichum orbiculare Cob_10938 N 0.000
CTHT_0043160 Chaetomium thermophilum CTHT_0043160 N 0.000
estExt_fgenesh3_kg.C_60109 Neurospora discreta estExt_fgenesh3_kg.C_60109 N 0.000
estExt_Genewise1Plus.C_90296 Cryphonectria parasitica estExt_Genewise1Plus.C_90296 N 0.000
estExt_Genewise1Plus.C_sca_2_chr3_3_00374 Nectria haematococca estExt_Genewise1Plus.C_sca_2_chr3_3_00374 N 0.000
EV44_g6401 Erysiphe necator EV44_g6401 N 0.000
F503_00791 Ophiostoma piceae uamh F503_00791 N 0.000
FFUJ_05884 Fusarium fujikuroi FFUJ_05884 N 0.000
FGRRES_08393 Fusarium graminearum FGRRES_08393 N 0.000
FOXG_03428 Fusarium oxysporum FOXG_03428 N 0.000
FPSE_09009 Fusarium pseudograminearum FPSE_09009 N 0.000
FVEG_02301 Fusarium verticillioides FVEG_02301 N 0.000
GGTG_07704 Gaeumannomyces graminis GGTG_07704 N 0.000
HCBG_03077 Histoplasma capsulatum HCBG_03077 N 0.000
MAPG_11122 Magnaporthe poae MAPG_11122 N 0.000
MBM_06382 Marssonina brunnea MBM_06382 N 0.000
MGG_07205 Magnaporthe oryzae MGG_07205 N 0.000
MYCTH_2307010 Myceliophthora thermophila MYCTH_2307010 N 0.000
NCU04830 Neurospora crassa NCU04830 N 0.000
NechaG67124 Fusarium solani NechaG67124 N 0.000
NEUTE1DRAFT_68581 Neurospora tetrasperma NEUTE1DRAFT_68581 N 0.000
OCS_00082 Ophiocordyceps sinensis OCS_00082 N 0.000
OIDMADRAFT_180132 Oidiodendron maius OIDMADRAFT_180132 N 0.000
PAAG_08210 Paracoccidioides sp lutzii PAAG_08210 N 0.000
PABG_07429 Paracoccidioides brasiliensis PABG_07429 N 0.000
PODANS_4_9520 Podospora anserina PODANS_4_9520 N 0.000
S40285_02676 Stachybotrys chlorohalonata S40285_02676 N 0.000
S40288_06143 Stachybotrys chartarum S40288_06143 N 0.000
SBOR_7105 Sclerotinia borealis SBOR_7105 N 0.000
SMAC_03468 Sordaria macrospora SMAC_03468 N 0.000
SPBR_01466 Sporothrix brasiliensis SPBR_01466 N 0.000
SS1G_09554 Sclerotinia sclerotiorum SS1G_09554 N 0.000
TRIATDRAFT_131396 Trichoderma atroviride TRIATDRAFT_131396 N 0.000
TRIREDRAFT_3856 Trichoderma reesei TRIREDRAFT_3856 N 0.000
TRIVIDRAFT_36706 Trichoderma virens TRIVIDRAFT_36706 N 0.000
VDAG_07460 Verticillium dahliae VDAG_07460 N 0.000
VDBG_09306 Verticillium alfalfae VDBG_09306 N 0.000
VDBG_09306 Verticillium albo atrum VDBG_09306 N 0.000
VHEMI06722 Torrubiella hemipterigena VHEMI06722 N 0.000