GPLIN_000113000 (Globodera pallida)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 GPLIN_000113000 T234011_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_000113000 Homeodomain 15 66

Links

Other Homeodomain family TFs
Other Globodera pallida TFs

279 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
1703276C Xenopus laevis 1703276C N 0.695
1703276D Xenopus laevis 1703276D I 0.695
AAA49750 Xenopus laevis AAA49750 N 0.731
AALB002897 Anopheles albimanus AALB002897 N 0.642
AALB002908 Anopheles albimanus AALB002908 N 0.666
Aan_R001812 Calypte anna Aan_R001812 N 0.651
Aan_R007134 Calypte anna Aan_R007134 I 0.651
AARA003138 Anopheles arabiensis AARA003138 N 0.774
AARA011782 Anopheles arabiensis AARA011782 I 0.757
AATE009299 Anopheles atroparvus AATE009299 I 0.757
AATE015217 Anopheles atroparvus AATE015217 N 0.605
ACAC_0000093601 Angiostrongylus cantonensis ACAC_0000093601 N 0.628
ACAC_0000671101 Angiostrongylus cantonensis ACAC_0000671101 N 0.623
ACEP24283 Atta cephalotes ACEP24283 N 0.645
ACHR008505 Anopheles christyi ACHR008505 N 0.688
ACOC_0000215101 Angiostrongylus costaricensis ACOC_0000215101 N 0.610
ACOC_0000334101 Angiostrongylus costaricensis ACOC_0000334101 N 0.628
ACOC_0000865601 Angiostrongylus costaricensis ACOC_0000865601 N 0.623
ACOM035026 Anopheles coluzzii ACOM035026 N 0.774
ACOM036085 Anopheles coluzzii ACOM036085 N 0.608
ACUA005475 Anopheles culicifacies ACUA005475 N 0.650
ACUA020431 Anopheles culicifacies ACUA020431 N 0.688
AEPI004568 Anopheles epiroticus AEPI004568 N 0.644
AEPI010384 Anopheles epiroticus AEPI010384 N 0.688
AEPI010666 Anopheles epiroticus AEPI010666 N 0.603
AFAF004701 Anopheles farauti AFAF004701 N 0.757
Afo_R002867 Aptenodytes forsteri Afo_R002867 I 0.651
Afo_R002868 Aptenodytes forsteri Afo_R002868 I 0.633
Afo_R012244 Aptenodytes forsteri Afo_R012244 N 0.612
Alligator_sinensis_CCG001661.1 Alligator sinensis Alligator_sinensis_CCG001661.1 I 0.701
Alligator_sinensis_CCG004967.1 Alligator sinensis Alligator_sinensis_CCG004967.1 N 0.720
Alligator_sinensis_CCG010660.1 Alligator sinensis Alligator_sinensis_CCG010660.1 N 0.721
AMAM004568 Anopheles maculatus AMAM004568 N 0.694
AMAM018190 Anopheles maculatus AMAM018190 I 0.649
AMAM021430 Anopheles maculatus AMAM021430 N 0.664
AMEM007254 Anopheles merus AMEM007254 N 0.761
AMIN006246 Anopheles minimus AMIN006246 N 0.649
ANCCAN_04049 Ancylostoma caninum ANCCAN_04049 I 0.600
ANCCAN_11756 Ancylostoma caninum ANCCAN_11756 N 0.639
ANCCAN_12383 Ancylostoma caninum ANCCAN_12383 N 0.633
ANCCAN_18983 Ancylostoma caninum ANCCAN_18983 N 0.628
ANCCAN_19464 Ancylostoma caninum ANCCAN_19464 N 0.604
ANCCAN_23849 Ancylostoma caninum ANCCAN_23849 N 0.646
ANCCAN_25804 Ancylostoma caninum ANCCAN_25804 N 0.618
ANCCAN_27026 Ancylostoma caninum ANCCAN_27026 N 0.646
ANCCEY_01003 Ancylostoma ceylanicum ANCCEY_01003 I 0.600
ANCCEY_10591 Ancylostoma ceylanicum ANCCEY_10591 N 0.628
ANCCEY_10891 Ancylostoma ceylanicum ANCCEY_10891 N 0.646
ANCDUO_02794 Ancylostoma duodenale ANCDUO_02794 N 0.600
ANCDUO_04800 Ancylostoma duodenale ANCDUO_04800 N 0.628
ANCDUO_09320 Ancylostoma duodenale ANCDUO_09320 N 0.641
ANCDUO_14985 Ancylostoma duodenale ANCDUO_14985 N 0.620
ANCDUO_19178 Ancylostoma duodenale ANCDUO_19178 N 0.611
ANCDUO_26697 Ancylostoma duodenale ANCDUO_26697 N 0.664
AQUA010391 Anopheles quadriannulatus AQUA010391 I 0.757
AQUA011152 Anopheles quadriannulatus AQUA011152 N 0.644
AQUA015309 Anopheles quadriannulatus AQUA015309 N 0.603
ASIM_0000060401 Anisakis simplex ASIM_0000060401 N 0.707
ASIM_0000175201 Anisakis simplex ASIM_0000175201 N 0.684
ASIM_0000357501 Anisakis simplex ASIM_0000357501 N 0.684
ASIM_0001450801 Anisakis simplex ASIM_0001450801 N 0.707
ASIM_0001810001 Anisakis simplex ASIM_0001810001 N 0.693
ASIS018446 Anopheles sinensis ASIS018446 N 0.600
ASIS021849 Anopheles sinensis ASIS021849 N 0.699
augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0 N 0.640
A_05714 Schistosoma haematobium A_05714 N 0.630
BGIBMGA003265 Bombyx mori BGIBMGA003265 N 0.733
BGIBMGA006390 Bombyx mori BGIBMGA006390 I 0.715
BGIBMGA006480 Bombyx mori BGIBMGA006480 N 0.655
BGIBMGA008456 Bombyx mori BGIBMGA008456 I 0.649
BGLB001080 Biomphalaria glabrata BGLB001080 N 0.626
BGLB001550 Biomphalaria glabrata BGLB001550 N 0.635
BGLB006778 Biomphalaria glabrata BGLB006778 N 0.622
BGLB007714 Biomphalaria glabrata BGLB007714 N 0.701
BGLB007719 Biomphalaria glabrata BGLB007719 N 0.713
BGLB007768 Biomphalaria glabrata BGLB007768 N 0.684
BGLB009053 Biomphalaria glabrata BGLB009053 N 0.654
BGLB011885 Biomphalaria glabrata BGLB011885 N 0.724
BGLB012524 Biomphalaria glabrata BGLB012524 N 0.633
Brh_R008378 Buceros rhinoceros Brh_R008378 I 0.649
BTMF_0000546301 Brugia timori BTMF_0000546301 N 0.737
CAA41845 Xenopus laevis CAA41845 N 0.695
CAA41846 Xenopus laevis CAA41846 I 0.695
CapteG142082 Capitella teleta CapteG142082 N 0.715
CBG05223 Caenorhabditis briggsae CBG05223 N 0.618
Cflo_00859--XP_394119.2_APIME Camponotus floridanus Cflo_00859--XP_394119.2_APIME N 0.735
Cflo_12078--XP_001122113.1_APIME Camponotus floridanus Cflo_12078--XP_001122113.1_APIME I 0.685
CGI_10026625 Crassostrea gigas CGI_10026625 N 0.733
CGOC_0001035201 Cylicostephanus goldi CGOC_0001035201 N 0.737
CLEC004114 Cimex lectularius CLEC004114 N 0.651
Cmyd_10005403 Chelonia mydas Cmyd_10005403 I 0.701
Cmyd_10007343 Chelonia mydas Cmyd_10007343 N 0.674
Cmyd_10012338 Chelonia mydas Cmyd_10012338 N 0.741
CPIJ004950 Culex quinquefasciatus CPIJ004950 N 0.604
CPIJ015449 Culex quinquefasciatus CPIJ015449 N 0.644
CPIJ016098 Culex quinquefasciatus CPIJ016098 N 0.644
CpipJ_CPIJ004950 Culex pipiens CpipJ_CPIJ004950 N 0.604
CpipJ_CPIJ015449 Culex pipiens CpipJ_CPIJ015449 N 0.644
CpipJ_CPIJ016098 Culex pipiens CpipJ_CPIJ016098 N 0.644
csin107937 Clonorchis sinensis csin107937 N 0.644
DAPPUDRAFT_50954 Daphnia pulex DAPPUDRAFT_50954 N 0.699
DICVIV_09128 Dictyocaulus viviparus DICVIV_09128 N 0.765
DILT_0000613101 Diphyllobothrium latum DILT_0000613101 N 0.724
DME_0000044501 Dracunculus medinensis DME_0000044501 N 0.784
DME_0000045101 Dracunculus medinensis DME_0000045101 N 0.793
ECPE_0000850801 Echinostoma caproni ECPE_0000850801 N 0.648
ENSACAG00000007695 Anolis carolinensis ENSACAG00000007695 N 0.604
ENSAMEG00000020243 Ailuropoda melanoleuca ENSAMEG00000020243 N 0.642
ENSAMXG00000008007 Astyanax mexicanus ENSAMXG00000008007 I 0.701
ENSBTAP00000023806-D2 Bos grunniens ENSBTAP00000023806-D2 N 0.633
HOXB3 Canis familiaris ENSCAFG00000028513 I 0.715
ENSCING00000011826 Ciona intestinalis ENSCING00000011826 N 0.670
ARX Callithrix jacchus ENSCJAG00000004737 N 0.633
ENSCSAG00000006765 Chlorocebus sabaeus ENSCSAG00000006765 N 0.720
hesx1 Danio rerio ENSDARG00000054509 N 0.606
ENSECAG00000008369 Equus caballus ENSECAG00000008369 I 0.642
ENSECAG00000017919 Equus caballus ENSECAG00000017919 I 0.681
ENSFALG00000010250 Ficedula albicollis ENSFALG00000010250 N 0.600
HMX2 Felis catus ENSFCAG00000023440 N 0.633
ENSFCAG00000025984 Felis catus ENSFCAG00000025984 N 0.731
MEOX1 Homo sapiens ENSG00000005102 D 0.626
BARX1 Homo sapiens ENSG00000131668 D 0.701
hoxc12a Gasterosteus aculeatus ENSGACG00000009391 N 0.696
DLX1 Gallus gallus ENSGALG00000018439 I 0.687
ENSGMOG00000017864 Gadus morhua ENSGMOG00000017864 N 0.696
VAX1 Loxodonta africana ENSLAFG00000018107 N 0.603
HOXB3 Meleagris gallopavo ENSMGAG00000002541 N 0.625
ENSMGAG00000009298 Meleagris gallopavo ENSMGAG00000009298 N 0.661
ENSMGAG00000010685 Meleagris gallopavo ENSMGAG00000010685 I 0.739
EVX1 Meleagris gallopavo ENSMGAG00000010703 N 0.614
RAX2 Microcebus murinus ENSMICG00000014768 I 0.626
DBX1 Myotis lucifugus ENSMLUG00000004774 N 0.650
HOXB3 Myotis lucifugus ENSMLUG00000008445 N 0.636
ENSMLUG00000022220 Myotis lucifugus ENSMLUG00000022220 N 0.727
ENSMMUG00000020182 Macaca mulatta ENSMMUG00000020182 N 0.626
ENSMMUP00000026575 Macaca fascicularis ENSMMUP00000026575 N 0.626
BARX2 Ornithorhynchus anatinus ENSOANG00000000573 N 0.690
ENSOANG00000007774 Ornithorhynchus anatinus ENSOANG00000007774 N 0.642
BSX Ornithorhynchus anatinus ENSOANG00000010303 N 0.664
ENSOCUG00000013528 Oryctolagus cuniculus ENSOCUG00000013528 I 0.635
GBX2 Oryzias latipes ENSORLG00000001376 I 0.641
ENSP00000417207-D1 Bos grunniens ENSP00000417207-D1 N 0.687
ENSPMAG00000008178 Petromyzon marinus ENSPMAG00000008178 N 0.700
ENSPMAG00000008834 Petromyzon marinus ENSPMAG00000008834 N 0.681
ENSPPYG00000029706 Pongo abelii ENSPPYG00000029706 N 0.605
ENSPSIG00000004928 Pelodiscus sinensis ENSPSIG00000004928 N 0.615
ENSPSIG00000017365 Pelodiscus sinensis ENSPSIG00000017365 N 0.639
HOXB2 Pan troglodytes ENSPTRG00000009352 I 0.738
LOC100912608 Rattus norvegicus ENSRNOG00000050252 I 0.727
ENSSHAG00000002450 Sarcophilus harrisii ENSSHAG00000002450 N 0.631
ENSSHAG00000011988 Sarcophilus harrisii ENSSHAG00000011988 I 0.630
ENSTGUG00000000339 Taeniopygia guttata ENSTGUG00000000339 N 0.641
ENSTGUG00000011379 Taeniopygia guttata ENSTGUG00000011379 I 0.651
ENSTSYG00000005123 Tarsius syrichta ENSTSYG00000005123 N 0.621
ENSVPAG00000005792 Vicugna pacos ENSVPAG00000005792 N 0.616
ENSVPAG00000010060 Vicugna pacos ENSVPAG00000010060 I 0.600
ENSXMAG00000013191 Xiphophorus maculatus ENSXMAG00000013191 N 0.650
EVEC_0001263401 Enterobius vermicularis EVEC_0001263401 N 0.606
e_gw.11.656.1 Branchiostoma floridae e_gw.11.656.1 N 0.658
GH13586 Drosophila grimshawi FBgn0121062 N 0.643
GI23625 Drosophila mojavensis FBgn0146351 N 0.619
GM17434 Drosophila sechellia FBgn0172344 I 0.694
GLYMA08G09430 Glycine max GLYMA08G09430 N 0.604
GPLIN_000138000 Globodera pallida GPLIN_000138000 N 0.719
GPLIN_000838600 Globodera pallida GPLIN_000838600 N 0.707
GPUH_0000701601 Gongylonema pulchrum GPUH_0000701601 N 0.604
GPUH_0001146601 Gongylonema pulchrum GPUH_0001146601 N 0.669
GPUH_0002138601 Gongylonema pulchrum GPUH_0002138601 N 0.669
Hba_10731 Heterorhabditis bacteriophora Hba_10731 N 0.639
Hba_17357 Heterorhabditis bacteriophora Hba_17357 N 0.624
HCOI02012200 Haemonchus contortus HCOI02012200 N 0.610
HelroG147207 Helobdella robusta HelroG147207 N 0.674
HelroG148863 Helobdella robusta HelroG148863 N 0.745
HHAL004742-PA Halyomorpha halys HHAL004742-PA N 0.675
HHAL004985-PA Halyomorpha halys HHAL004985-PA N 0.642
HHAL009617-PA Halyomorpha halys HHAL009617-PA N 0.667
HMEL002756 Heliconius melpomene HMEL002756 N 0.747
HMEL003744 Heliconius melpomene HMEL003744 N 0.735
HMEL010247 Heliconius melpomene HMEL010247 N 0.681
HMEL016138 Heliconius melpomene HMEL016138 N 0.733
HNAJ_0000607701 Hymenolepis nana HNAJ_0000607701 N 0.768
HNAJ_0000873601 Hymenolepis nana HNAJ_0000873601 N 0.697
HPBE_0002029201 Heligmosomoides bakeri HPBE_0002029201 N 0.763
HPBE_0002330201 Heligmosomoides bakeri HPBE_0002330201 N 0.600
HPBE_0002651601 Heligmosomoides bakeri HPBE_0002651601 N 0.634
Hsal_06516--XP_001122113.1_APIME Harpegnathos saltator Hsal_06516--XP_001122113.1_APIME I 0.685
ISCW001024 Ixodes scapularis ISCW001024 N 0.621
KGM_13123 Danaus plexippus KGM_13123 N 0.704
KGM_15359 Danaus plexippus KGM_15359 N 0.629
KGM_21794 Danaus plexippus KGM_21794 I 0.715
L596_g18563 Steinernema carpocapsae L596_g18563 N 0.604
L798_03158 Zootermopsis nevadensis L798_03158 N 0.649
L798_10070 Zootermopsis nevadensis L798_10070 N 0.644
LCUP010920 Lucilia cuprina LCUP010920 N 0.643
LCUP015732 Lucilia cuprina LCUP015732 N 0.644
LDEC001874 Leptinotarsa decemlineata LDEC001874 N 0.665
LDEC016573 Leptinotarsa decemlineata LDEC016573 N 0.635
LLOJ003466 Lutzomyia longipalpis LLOJ003466 N 0.720
LLOJ004702 Lutzomyia longipalpis LLOJ004702 N 0.650
maker-nMf.1.1.scaf05303-snap-gene-0.8 Meloidogyne floridensis maker-nMf.1.1.scaf05303-snap-gene-0.8 N 0.734
MCINX006168 Melitaea cinxia MCINX006168 N 0.611
MESCA011418 Megaselia scalaris MESCA011418 N 0.772
MhA1_Contig121.frz3.gene75 Meloidogyne hapla MhA1_Contig121.frz3.gene75 N 0.690
Minc02159 Meloidogyne incognita Minc02159 N 0.628
Minc16530 Meloidogyne incognita Minc16530 N 0.625
Myotis_brandtii_Barx2_10007775 Myotis brandtii Myotis_brandtii_Barx2_10007775 N 0.681
NBR_0000086301 Nippostrongylus brasiliensis NBR_0000086301 N 0.623
NBR_0002203301 Nippostrongylus brasiliensis NBR_0002203301 N 0.682
nDi.2.2.2.g10376 Dirofilaria immitis nDi.2.2.2.g10376 N 0.707
nDi.2.2.2.g10679 Dirofilaria immitis nDi.2.2.2.g10679 I 0.666
nDi.2.2.2.g11810 Dirofilaria immitis nDi.2.2.2.g11810 I 0.682
NECAME_04746 Necator americanus NECAME_04746 N 0.616
NECAME_11765 Necator americanus NECAME_11765 N 0.616
NECAME_15451 Necator americanus NECAME_15451 N 0.789
NECAME_16917 Necator americanus NECAME_16917 N 0.666
NEMVEDRAFT_v1g101680 Nematostella vectensis NEMVEDRAFT_v1g101680 N 0.716
NEMVEDRAFT_v1g128275 Nematostella vectensis NEMVEDRAFT_v1g128275 N 0.770
NEMVEDRAFT_v1g128296 Nematostella vectensis NEMVEDRAFT_v1g128296 N 0.768
NEMVEDRAFT_v1g150519 Nematostella vectensis NEMVEDRAFT_v1g150519 N 0.637
nLs.2.1.2.g07663 Litomosoides sigmodontis nLs.2.1.2.g07663 N 0.606
nOo.2.0.1.g04758 Onchocerca ochengi nOo.2.0.1.g04758 N 0.606
nOo.2.0.1.g09403 Onchocerca ochengi nOo.2.0.1.g09403 N 0.666
Ocbimv22010205m.g Octopus bimaculoides Ocbimv22010205m.g N 0.739
Ocbimv22024994m.g Octopus bimaculoides Ocbimv22024994m.g N 0.647
OFLC_0000421701 Onchocerca flexuosa OFLC_0000421701 N 0.639
OFLC_0001211001 Onchocerca flexuosa OFLC_0001211001 N 0.713
Ogr05500 Ophisaurus gracilis Ogr05500 N 0.619
Ogr09559 Ophisaurus gracilis Ogr09559 N 0.651
Ogr19002 Ophisaurus gracilis Ogr19002 N 0.628
PEQ_0000993201 Parascaris equorum PEQ_0000993201 N 0.633
PHUM265030 Pediculus humanus PHUM265030 I 0.715
PPA08598 Pristionchus pacificus PPA08598 N 0.612
PPA25533 Pristionchus pacificus PPA25533 N 0.611
PPAI003186 Phlebotomus papatasi PPAI003186 N 0.658
PPAI007203 Phlebotomus papatasi PPAI007203 N 0.649
PXEA_0000455101 Protopolystoma xenopodis PXEA_0000455101 N 0.666
PXEA_0000638901 Protopolystoma xenopodis PXEA_0000638901 N 0.648
PXEA_0003648301 Protopolystoma xenopodis PXEA_0003648301 N 0.644
RPRC002486 Rhodnius prolixus RPRC002486 I 0.644
RPRC010976 Rhodnius prolixus RPRC010976 I 0.649
SBAD_0000398601 Soboliphyme baturini SBAD_0000398601 N 0.610
SBAD_0000495201 Soboliphyme baturini SBAD_0000495201 N 0.649
scaffold493-EXSNAP2012.8 Pristionchus exspectatus scaffold493-EXSNAP2012.8 N 0.682
scaffold958-EXSNAP2012.2 Pristionchus exspectatus scaffold958-EXSNAP2012.2 N 0.604
Sjc_0051970 Schistosoma japonicum Sjc_0051970 N 0.604
SMAR012377 Strigamia maritima SMAR012377 N 0.644
Smp_136900 Schistosoma mansoni Smp_136900 N 0.622
Smp_169500 Schistosoma mansoni Smp_169500 N 0.681
SMTD_0001030501 Schistosoma mattheei SMTD_0001030501 N 0.628
SMTD_0001153001 Schistosoma mattheei SMTD_0001153001 N 0.724
SNAPOd2T00002147001 Oikopleura dioica SNAPOd2T00002147001 N 0.722
snap_masked-nMf.1.1.scaf17493-processed-gene-0.1 Meloidogyne floridensis snap_masked-nMf.1.1.scaf17493-processed-gene-0.1 N 0.616
SPAL_0000530600 Strongyloides papillosus SPAL_0000530600 N 0.641
SPER_0001567701 Spirometra erinaceieuropaei SPER_0001567701 N 0.724
SPER_0001728701 Spirometra erinaceieuropaei SPER_0001728701 N 0.661
SPER_0002183801 Spirometra erinaceieuropaei SPER_0002183801 N 0.651
SPER_0003632001 Spirometra erinaceieuropaei SPER_0003632001 N 0.659
SPER_0003833401 Spirometra erinaceieuropaei SPER_0003833401 N 0.659
SROB_0001224301 Schistosoma rodhaini SROB_0001224301 N 0.611
SSLN_0000633001 Schistocephalus solidus SSLN_0000633001 N 0.659
SVUK_0001081801 Strongylus vulgaris SVUK_0001081801 N 0.635
T265_06348 Opisthorchis viverrini T265_06348 N 0.644
T265_10782 Opisthorchis viverrini T265_10782 N 0.664
T265_14387 Opisthorchis viverrini T265_14387 N 0.649
Tal_R004953 Tyto alba Tal_R004953 N 0.755
Tal_R008067 Tyto alba Tal_R008067 I 0.764
TCNE_0000939301 Toxocara canis TCNE_0000939301 N 0.649
tetur02g09110 Tetranychus urticae tetur02g09110 N 0.604
TRE_0000162501 Trichobilharzia regenti TRE_0000162501 N 0.623
TRE_0000179101 Trichobilharzia regenti TRE_0000179101 N 0.659
TTAC_0000146101 Hydatigera taeniaeformis TTAC_0000146101 N 0.781
TTAC_0000574501 Hydatigera taeniaeformis TTAC_0000574501 N 0.606
WUBG_02755 Wuchereria bancrofti WUBG_02755 N 0.717
WUBG_03180 Wuchereria bancrofti WUBG_03180 N 0.631
WUBG_09511 Wuchereria bancrofti WUBG_09511 N 0.633
hoxb2.S Xenopus laevis XB-GENE-478530 I 0.738
hoxa11.S Xenopus laevis XB-GENE-483246 I 0.721
hoxc6.S Xenopus laevis XB-GENE-865143 I 0.757
YQE_10731 Dendroctonus ponderosae YQE_10731 N 0.603