CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
maker-nMf.1.1.scaf23008-snap-gene-0.4
(
Meloidogyne floridensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
maker-nMf.1.1.scaf23008-snap-gene-0.4
T235054_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf23008-snap-gene-0.4-mRNA-1
Homeodomain
40
113
RRERYVFRPVLLRILDAYFQESPFPDTSKRMEIANACNAHLQLDKKSTQLMPKEVVTPQVVANWFANKRKEMRR
Links
Other
Homeodomain
family TFs
Other
Meloidogyne floridensis
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000006438
Ailuropoda melanoleuca
ENSAMEG00000006438
N
ENSBTAG00000008911
Bos taurus
ENSBTAG00000008911
N
ZXDC
Bos taurus
ENSBTAG00000009874
N
ENSBTAG00000031523
Bos taurus
ENSBTAG00000031523
N
ZXDC
Canis familiaris
ENSCAFG00000003826
N
ENSCAFG00000016517
Canis familiaris
ENSCAFG00000016517
N
ENSCJAG00000003009
Callithrix jacchus
ENSCJAG00000003009
N
ZXDC
Cavia porcellus
ENSCPOG00000002150
N
ENSCPOG00000005007
Cavia porcellus
ENSCPOG00000005007
N
ENSCSAG00000008075
Chlorocebus sabaeus
ENSCSAG00000008075
N
ENSCSAG00000019499
Chlorocebus sabaeus
ENSCSAG00000019499
N
ENSCSAG00000019500
Chlorocebus sabaeus
ENSCSAG00000019500
N
ENSFCAG00000005774
Felis catus
ENSFCAG00000005774
N
ZXDC
Homo sapiens
ENSG00000070476
N
ZXDB
Homo sapiens
ENSG00000198455
N
ZXDC
Gorilla gorilla
ENSGGOG00000009938
N
ZXDB
Gorilla gorilla
ENSGGOG00000011651
N
ZXDA
Gorilla gorilla
ENSGGOG00000024746
N
ENSLAFG00000017963
Loxodonta africana
ENSLAFG00000017963
N
ENSMICG00000009255
Microcebus murinus
ENSMICG00000009255
N
ENSMMUG00000004920
Macaca mulatta
ENSMMUG00000004920
N
ZXDA
Macaca mulatta
ENSMMUG00000019432
N
ENSMPUG00000015900
Mustela putorius furo
ENSMPUG00000015900
N
ENSMPUG00000017379
Mustela putorius furo
ENSMPUG00000017379
N
ENSMPUG00000019780
Mustela putorius furo
ENSMPUG00000019780
N
Zxdc
Mus musculus
ENSMUSG00000034430
N
ENSOARG00000004624
Ovis aries
ENSOARG00000004624
N
ENSOARG00000005360
Ovis aries
ENSOARG00000005360
N
ENSOCUG00000003505
Oryctolagus cuniculus
ENSOCUG00000003505
N
ZXDC
Oryctolagus cuniculus
ENSOCUG00000022942
N
ENSOGAG00000009487
Otolemur garnettii
ENSOGAG00000009487
N
ENSOGAG00000025034
Otolemur garnettii
ENSOGAG00000025034
N
ZXDC
Otolemur garnettii
ENSOGAG00000028511
N
ZXDC
Ochotona princeps
ENSOPRG00000005300
N
ENSP00000351530
Macaca fascicularis
ENSP00000351530
N
ENSP00000351530-D2
Bos grunniens
ENSP00000351530-D2
N
ENSP00000364023
Macaca fascicularis
ENSP00000364023
N
ENSP00000364023-D1
Bos grunniens
ENSP00000364023-D1
N
ENSPANG00000000433
Papio anubis
ENSPANG00000000433
N
ENSPANG00000023784
Papio anubis
ENSPANG00000023784
N
ENSPCAG00000012425
Procavia capensis
ENSPCAG00000012425
N
ENSPPYG00000013453
Pongo abelii
ENSPPYG00000013453
N
ENSPPYG00000020407
Pongo abelii
ENSPPYG00000020407
N
ZXDC
Pan troglodytes
ENSPTRG00000015332
N
ZXDB
Pan troglodytes
ENSPTRG00000028265
N
Zxdc
Rattus norvegicus
ENSRNOG00000025818
N
ENSSSCG00000012359
Sus scrofa
ENSSSCG00000012359
N
ENSSTOG00000007207
Ictidomys tridecemlineatus
ENSSTOG00000007207
N
ENSSTOG00000021364
Ictidomys tridecemlineatus
ENSSTOG00000021364
N
ENSTBEG00000001799
Tupaia belangeri
ENSTBEG00000001799
N
ENSTSYG00000007412
Tarsius syrichta
ENSTSYG00000007412
N
ENSTTRG00000004499
Tursiops truncatus
ENSTTRG00000004499
N