CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nRc.2.0.1.g06030
(
Romanomermis culicivorax
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
nRc.2.0.1.g06030
T235507_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nRc.2.0.1.t06030-RA
Homeodomain
46
100
KKPRLVFTDIQRRTLQAIFKETKRPSKEMQVTIAQQLALDVTTVANFFMNARRRG
Links
Other
Homeodomain
family TFs
Other
Romanomermis culicivorax
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R011702
Calypte anna
Aan_R011702
N
0.785
Aan_R013281
Calypte anna
Aan_R013281
N
0.785
Afo_R000657
Aptenodytes forsteri
Afo_R000657
N
0.785
Afo_R010054
Aptenodytes forsteri
Afo_R010054
N
0.785
BGLB010770
Biomphalaria glabrata
BGLB010770
N
0.849
Brh_R003300
Buceros rhinoceros
Brh_R003300
N
0.793
Brh_R008816
Buceros rhinoceros
Brh_R008816
N
0.785
Brh_R012220
Buceros rhinoceros
Brh_R012220
N
0.785
Cflo_07826--XP_624996.2_APIME
Camponotus floridanus
Cflo_07826--XP_624996.2_APIME
N
0.795
CGOC_0000046201
Cylicostephanus goldi
CGOC_0000046201
N
0.702
CLEC007919
Cimex lectularius
CLEC007919
N
0.795
Cmyd_10006710
Chelonia mydas
Cmyd_10006710
N
0.785
Cmyd_10014201
Chelonia mydas
Cmyd_10014201
N
0.793
D917_03505
Trichinella nativa
D917_03505
N
0.865
D918_08253
Trichuris suis
D918_08253
N
0.865
D_00388
Schistosoma haematobium
D_00388
N
0.849
EFV55313
Trichinella spiralis
EFV55313
N
0.865
ENSAMEG00000018694
Ailuropoda melanoleuca
ENSAMEG00000018694
N
0.785
ENSAMXG00000017686
Astyanax mexicanus
ENSAMXG00000017686
N
0.787
ENSBTAP00000010868-D3
Bos grunniens
ENSBTAP00000010868-D3
N
0.785
ENSMGAG00000006142
Meleagris gallopavo
ENSMGAG00000006142
N
0.793
ENSMICG00000001025
Microcebus murinus
ENSMICG00000001025
N
0.785
ENSMMUG00000000191
Macaca mulatta
ENSMMUG00000000191
N
0.785
ENSMMUP00000032000
Macaca fascicularis
ENSMMUP00000032000
N
0.785
ENSOANG00000008148
Ornithorhynchus anatinus
ENSOANG00000008148
N
0.793
ENSOANG00000014925
Ornithorhynchus anatinus
ENSOANG00000014925
N
0.785
Onecut3
Rattus norvegicus
ENSRNOG00000059889
N
0.785
ENSTNIG00000004331
Tetraodon nigroviridis
ENSTNIG00000004331
N
0.785
EVEC_0000948101
Enterobius vermicularis
EVEC_0000948101
N
0.833
Gfo_R003038
Geospiza fortis
Gfo_R003038
N
0.785
Gfo_R007594
Geospiza fortis
Gfo_R007594
N
0.785
GPUH_0000232301
Gongylonema pulchrum
GPUH_0000232301
N
0.833
gw.66.125.1
Branchiostoma floridae
gw.66.125.1
N
0.773
HDID_0000181401
Hymenolepis diminuta
HDID_0000181401
N
0.816
HelroG65724
Helobdella robusta
HelroG65724
N
0.827
HHAL003722-PA
Halyomorpha halys
HHAL003722-PA
N
0.795
HPLM_0000364101
Haemonchus placei
HPLM_0000364101
N
0.832
ISCW015625
Ixodes scapularis
ISCW015625
N
0.771
L798_07539
Zootermopsis nevadensis
L798_07539
N
0.795
MCOS_0000769201
Mesocestoides corti
MCOS_0000769201
N
0.828
Myotis_brandtii_Onecut1_10025995
Myotis brandtii
Myotis_brandtii_Onecut1_10025995
N
0.793
Ocbimv22034216m.g
Octopus bimaculoides
Ocbimv22034216m.g
N
0.849
Ogr01623
Ophisaurus gracilis
Ogr01623
N
0.785
Ogr02782
Ophisaurus gracilis
Ogr02782
N
0.789
PEQ_0000468501
Parascaris equorum
PEQ_0000468501
N
0.702
Pvit_17411
Pogona vitticeps
Pvit_17411
N
0.793
scaffold144-EXSNAP2012.48
Pristionchus exspectatus
scaffold144-EXSNAP2012.48
N
0.832
SMRZ_0002529501
Schistosoma margrebowiei
SMRZ_0002529501
N
0.849
SMTD_0000798901
Schistosoma mattheei
SMTD_0000798901
N
0.849
SMUV_0001032901
Syphacia muris
SMUV_0001032901
N
0.833
SROB_0000955701
Schistosoma rodhaini
SROB_0000955701
N
0.849
Tal_R009878
Tyto alba
Tal_R009878
N
0.785
Tal_R009917
Tyto alba
Tal_R009917
N
0.793
TELCIR_12105
Teladorsagia circumcincta
TELCIR_12105
N
0.702
TELCIR_14748
Teladorsagia circumcincta
TELCIR_14748
N
0.832