SSLN_0001599301 (Schistocephalus solidus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SSLN_0001599301 T236460_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.611 0.391
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.611 0.391
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.611 0.391
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SSLN_0001599301-mRNA-1 Homeodomain 60 105

Links

Other Homeodomain family TFs
Other Schistocephalus solidus TFs

265 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bcin04g01650 Botrytis cinerea Bcin04g01650 N 0.000
gw1.00626.12.1 Aspergillus carbonarius gw1.00626.12.1 I 0.000
V499_09156 Pseudogymnoascus pannorum V499_09156 N 0.000