TTAC_0000818201 (Hydatigera taeniaeformis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 TTAC_0000818201 T237134_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.809 0.893
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.797 0.893
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.775 0.875
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.775 0.875
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.775 0.875
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.767 0.839
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.767 0.839
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.767 0.839
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.755 0.821
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.755 0.821
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.755 0.821
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.755 0.821
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.755 0.821
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.755 0.821
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TTAC_0000818201-mRNA-1 Homeodomain 201 259

Links

Other Homeodomain family TFs
Other Hydatigera taeniaeformis TFs

381 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA011055 Oryza indica BGIOSGA011055 N
F775_05339 Aegilops tauschii F775_05339 N
MLOC_55252 Hordeum vulgare MLOC_55252 N
OB03G21750 Oryza brachyantha OB03G21750 N
OBART03G11590 Oryza barthii OBART03G11590 N
OMERI03G10870 Oryza meridionalis OMERI03G10870 N
ONIVA03G12790 Oryza nivara ONIVA03G12790 N
OPUNC03G11140 Oryza punctata OPUNC03G11140 N
ORGLA03G0112000 Oryza glaberrima ORGLA03G0112000 N
ORUFI03G11940 Oryza rufipogon ORUFI03G11940 N
OS03G0264600 Oryza sativa OS03G0264600 N
Traes_4BL_3B919C814 Triticum aestivum Traes_4BL_3B919C814 N
Traes_4BS_6BEE72C38 Triticum aestivum Traes_4BS_6BEE72C38 N
Traes_4DL_AA51A43E7 Triticum aestivum Traes_4DL_AA51A43E7 N