Bra022949 (Brassica rapa)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 Bra022949 T239859_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.349 0.416
HSFB4
M06936_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFB4_col_a 		0.331 0.337
HSFB3
M06937_2.00 		Arabidopsis thaliana
RRAANMWTCTAGAAV
BTTCTAGAWKNTTYY		 Dap-seq
OMalley et al.(2016)
HSFB3_col_a 		0.325 0.348
HSFB3
M06938_2.00 		Arabidopsis thaliana
AABSTTCTAGAAN
NTTCTAGAASVTT		 Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a 		0.325 0.348
HSFB2A
M00869_2.00 		Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN		 PBM
Franco-Zorrilla et al.(2014)
HSFB2A 		0.322 0.326
HSFB2A
M06952_2.00 		Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF6_col_a 		0.322 0.326
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra022949.1-P HSF 15 112

Links

Other HSF family TFs
Other Brassica rapa TFs

574 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL009171 Aedes aegypti AAEL009171 N
AALB007121 Anopheles albimanus AALB007121 N
AARA010071 Anopheles arabiensis AARA010071 N
AATE016879 Anopheles atroparvus AATE016879 N
ACEP24968 Atta cephalotes ACEP24968 N
ACHR006959 Anopheles christyi ACHR006959 N
ACOM034973 Anopheles coluzzii ACOM034973 N
ACUA023615 Anopheles culicifacies ACUA023615 N
ACYPI008922 Acyrthosiphon pisum ACYPI008922 N
ADAC008608 Anopheles darlingi ADAC008608 N
ADIR002890 Anopheles dirus ADIR002890 N
AEPI007432 Anopheles epiroticus AEPI007432 N
AFAF018426 Anopheles farauti AFAF018426 N
AFUN001494 Anopheles funestus AFUN001494 N
AGAP003726 Anopheles gambiae AGAP003726 N
AMEC020789 Anopheles melas AMEC020789 N
AMEM010172 Anopheles merus AMEM010172 N
AMIN002970 Anopheles minimus AMIN002970 N
AQUA001486 Anopheles quadriannulatus AQUA001486 N
ASTEI00671 Anopheles stephensi ASTEI00671 N
BGIBMGA011510 Bombyx mori BGIBMGA011510 N
CapteG195496 Capitella teleta CapteG195496 N
CGI_10009013 Crassostrea gigas CGI_10009013 N
CPIJ001396 Culex quinquefasciatus CPIJ001396 N
CpipJ_CPIJ001396 Culex pipiens CpipJ_CPIJ001396 N
DAPPUDRAFT_191081 Daphnia pulex DAPPUDRAFT_191081 N
estExt_fgenesh2_pg.C_4800031 Branchiostoma floridae estExt_fgenesh2_pg.C_4800031 N
CG13624 Drosophila melanogaster FBgn0039209 N
GG12336 Drosophila erecta FBgn0104626 N
GM23477 Drosophila sechellia FBgn0178344 N
GD18285 Drosophila simulans FBgn0189818 N
GJ23851 Drosophila virilis FBgn0210946 N
GK14305 Drosophila willistoni FBgn0216311 N
fgenesh2_pg.scaffold_447000002 Branchiostoma floridae fgenesh2_pg.scaffold_447000002 N
GB44555 Apis mellifera GB44555 N
HHAL003878-PA Halyomorpha halys HHAL003878-PA N
HMEL006500 Heliconius melpomene HMEL006500 N
Hsal_14938--XP_397095.2_APIME Harpegnathos saltator Hsal_14938--XP_397095.2_APIME N
ISCW005126 Ixodes scapularis ISCW005126 N
LDEC013255 Leptinotarsa decemlineata LDEC013255 N
LLOJ008588 Lutzomyia longipalpis LLOJ008588 N
LotgiG231402 Lottia gigantea LotgiG231402 N
MCINX002154 Melitaea cinxia MCINX002154 N
NEMVEDRAFT_v1g238168 Nematostella vectensis NEMVEDRAFT_v1g238168 N
NV18305 Nasonia vitripennis NV18305 N
Ocbimv22031434m.g Octopus bimaculoides Ocbimv22031434m.g N
PHUM239100 Pediculus humanus PHUM239100 N
PPAI007084 Phlebotomus papatasi PPAI007084 N
RPRC005655 Rhodnius prolixus RPRC005655 N
Sakowv30041832m.g Saccoglossus kowalevskii Sakowv30041832m.g N
SMAR013202 Strigamia maritima SMAR013202 N
TC000275 Tribolium castaneum TC000275 N
tetur43g00160 Tetranychus urticae tetur43g00160 N
YQE_10681 Dendroctonus ponderosae YQE_10681 N