CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

LPERR09G09190 *(Leersia perrieri)* HSF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00447 (HSF_DNA-bind)	IPR000232	LPERR09G09190	T241053_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
HSFB4 M06936_2.00	Arabidopsis thaliana	RGAASNTTCTAGAAN	NTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFB4_col_a	0.453	0.713
HSFB2B M06945_2.00	Arabidopsis thaliana	RGAANNTTCTAGAA	TTCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSF7_col_a	0.450	0.724
HSFB2B M06946_2.00	Arabidopsis thaliana	RGAANNTTCTAGAA	TTCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSF7_colamp_a	0.450	0.724
HSFB3 M06937_2.00	Arabidopsis thaliana	RRAANMWTCTAGAAV	BTTCTAGAWKNTTYY	Dap-seq OMalley et al.(2016) HSFB3_col_a	0.432	0.690
HSFB3 M06938_2.00	Arabidopsis thaliana	AABSTTCTAGAAN	NTTCTAGAASVTT	Dap-seq OMalley et al.(2016) HSFB3_colamp_a	0.432	0.690
HSFB2A M00869_2.00	Arabidopsis thaliana	NNNNNTTCB	VGAANNNNN	PBM Franco-Zorrilla et al.(2014) HSFB2A	0.423	0.701
HSFB2A M06952_2.00	Arabidopsis thaliana	GAANNTTCYAGA	TCTRGAANNTTC	Dap-seq OMalley et al.(2016) HSF6_col_a	0.423	0.701
HSFC1 M00868_2.00	Arabidopsis thaliana	NDTCBNNN	NNNVGAHN	PBM Franco-Zorrilla et al.(2014) HSFC1	0.416	0.609
HSFC1 M06943_2.00	Arabidopsis thaliana	GAASNTTCTAG	CTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFC1_col_a	0.416	0.609
HSFC1 M06944_2.00	Arabidopsis thaliana	RGAASNTTCTAGAANVW	WBNTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFC1_colamp_a	0.416	0.609
HSFA4A M06947_2.00	Arabidopsis thaliana	NNNRGAABBTTCTAGAANN	NNTTCTAGAAVVTTCYNNN	Dap-seq OMalley et al.(2016) HSF21_col_a	0.393	0.609
HSFA1E M06939_2.00	Arabidopsis thaliana	RGAANNTTCTAGA	TCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSFA1E_col_a	0.371	0.632
HSFA1E M06940_2.00	Arabidopsis thaliana	RGAASNTTCTAGAAN	NTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFA1E_colamp_a	0.371	0.632
HSFA6B M06941_2.00	Arabidopsis thaliana	RGAASNTTCTAGA	TCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFA6B_colamp_a	0.360	0.655
HSFA6B M06942_2.00	Arabidopsis thaliana	RGAABNTTCTRGAAN	NTTCYAGAANVTTCY	Dap-seq OMalley et al.(2016) HSFA6B_col	0.360	0.655
HSFA6A M06950_2.00	Arabidopsis thaliana	GAASNTTCTAGAANNW	WNNTTCTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFA6A_col_a	0.356	0.575
HSFA6A M06951_2.00	Arabidopsis thaliana	GAASNTTCTAGAA	TTCTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFA6A_colamp_a	0.356	0.575
HSFA1B M06948_2.00	Arabidopsis thaliana	GAANNTTCTAGA	TCTAGAANNTTC	Dap-seq OMalley et al.(2016) HSF3_col_a	0.351	0.644
HSFA1B M06949_2.00	Arabidopsis thaliana	TTCYRG	CYRGAA	Dap-seq OMalley et al.(2016) HSF3_colamp_a	0.351	0.644
For this family, TFs with SR scores > 0.318* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
LPERR09G09190.1	HSF	30	120	FLTKTHQMVEENATDEVISWGKEGRSFVVWKPVEFARDLLPLHFKHCNFSSFVRQLNTYGFRKVVPDRWEFANGNFRRGEQGLLSGIRRRK

Links
Other HSF family TFs
Other *Leersia perrieri* TFs

1406 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
BGIOSGA029546	Oryza indica	BGIOSGA029546	N
BRADI4G33740	Brachypodium distachyon	BRADI4G33740	N
GRMZM2G000842	Zea mays	GRMZM2G000842	N
GRMZM2G006578	Zea mays	GRMZM2G006578	N
GRMZM2G060290	Zea mays	GRMZM2G060290	N
LPERR09G02550	Leersia perrieri	LPERR09G02550	N
LPERR09G10860	Leersia perrieri	LPERR09G10860	N
OB09G12290	Oryza brachyantha	OB09G12290	N
OB09G21260	Oryza brachyantha	OB09G21260	N
OBART09G14730	Oryza barthii	OBART09G14730	N
OGLUM09G15360	Oryza glumaepatula	OGLUM09G15360	N
OMERI09G11450	Oryza meridionalis	OMERI09G11450	N
ONIVA08G17430	Oryza nivara	ONIVA08G17430	N
OPUNC09G13200	Oryza punctata	OPUNC09G13200	N
ORGLA09G0113500	Oryza glaberrima	ORGLA09G0113500	N
ORUFI09G15880	Oryza rufipogon	ORUFI09G15880	N
OS09G0489500	Oryza sativa	OS09G0489500	N
Pavir.Ba01723	Panicum virgatum	Pavir.Ba01723	N
Pavir.Db00756	Panicum virgatum	Pavir.Db00756	N
Pavir.J08325	Panicum virgatum	Pavir.J08325	N
Pavir.J32240	Panicum virgatum	Pavir.J32240	N
PGSC0003DMG400011430	Solanum tuberosum	PGSC0003DMG400011430	I
Sb02g028380	Sorghum bicolor	Sb02g028380	N
Sb10g024190	Sorghum bicolor	Sb10g024190	N
Si006417m.g	Setaria italica	Si006417m.g	N
Si022106m.g	Setaria italica	Si022106m.g	N
Si029606m.g	Setaria italica	Si029606m.g	N
Solyc10g078670.1	Solanum lycopersicum	Solyc10g078670.1	I
Traes_5AL_39649C38E	Triticum aestivum	Traes_5AL_39649C38E	N
Traes_5BL_C08428870	Triticum aestivum	Traes_5BL_C08428870	N
Traes_5DL_1950C1FC2	Triticum aestivum	Traes_5DL_1950C1FC2	N

LPERR09G09190 (Leersia perrieri) HSF

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1406 Related TFs

LPERR09G09190 **(Leersia perrieri)
HSF**