CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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M408DRAFT_138020
(
Serendipita vermifera
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00447 (HSF_DNA-bind)
IPR000232
M408DRAFT_138020
T241099_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SKN7
M00061_2.00
Saccharomyces cerevisiae
AYGGCCRG
CYGGCCRT
PBM
Badis et al.(2008)
SKN7_2117
0.368
0.600
SKN7
M01555_2.00
Saccharomyces cerevisiae
NBGGCBDNNN
NNNHVGCCVN
PBM
Zhu et al.(2009)
Skn7
0.368
0.600
SKN7
M07490_2.00
Saccharomyces cerevisiae
GGCCRN
NYGGCC
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0381.1
0.368
0.600
SKN7
M08582_2.00
Saccharomyces cerevisiae
GBCBVGSCS
SGSCBVGVC
Misc
DeBoer et al.(2011)
YHR206W_380
0.368
0.600
SKN7
M08583_2.00
Saccharomyces cerevisiae
GGCCRN
NYGGCC
Misc
DeBoer et al.(2011)
YHR206W_583
0.368
0.600
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIM28664
HSF
75
173
FVRKLFRMLEDPAFASIVCWGSQRDCFIVKDMTEFTKVILPRLFKHSNFASFVRQLNKYDFHKVKNTDENAYGEHCWTFRHPKFRADHLDGLEDIKRKS
Links
Other
HSF
family TFs
Other
Serendipita vermifera
TFs
249 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MYCFIDRAFT_183812
Pseudocercospora fijiensis
MYCFIDRAFT_183812
N