CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

MTR_5g017470 *(Medicago truncatula)* HSF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00447 (HSF_DNA-bind)	IPR000232	MTR_5g017470	T241284_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
HSFB2B M06945_2.00	Arabidopsis thaliana	RGAANNTTCTAGAA	TTCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSF7_col_a	0.432	0.747
HSFB2B M06946_2.00	Arabidopsis thaliana	RGAANNTTCTAGAA	TTCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSF7_colamp_a	0.432	0.747
HSFB4 M06936_2.00	Arabidopsis thaliana	RGAASNTTCTAGAAN	NTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFB4_col_a	0.425	0.724
HSFB2A M00869_2.00	Arabidopsis thaliana	NNNNNTTCB	VGAANNNNN	PBM Franco-Zorrilla et al.(2014) HSFB2A	0.417	0.713
HSFB2A M06952_2.00	Arabidopsis thaliana	GAANNTTCYAGA	TCTRGAANNTTC	Dap-seq OMalley et al.(2016) HSF6_col_a	0.417	0.713
HSFC1 M00868_2.00	Arabidopsis thaliana	NDTCBNNN	NNNVGAHN	PBM Franco-Zorrilla et al.(2014) HSFC1	0.405	0.632
HSFC1 M06943_2.00	Arabidopsis thaliana	GAASNTTCTAG	CTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFC1_col_a	0.405	0.632
HSFC1 M06944_2.00	Arabidopsis thaliana	RGAASNTTCTAGAANVW	WBNTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFC1_colamp_a	0.405	0.632
HSFA4A M06947_2.00	Arabidopsis thaliana	NNNRGAABBTTCTAGAANN	NNTTCTAGAAVVTTCYNNN	Dap-seq OMalley et al.(2016) HSF21_col_a	0.403	0.632
HSFA1E M06939_2.00	Arabidopsis thaliana	RGAANNTTCTAGA	TCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSFA1E_col_a	0.389	0.690
HSFA1E M06940_2.00	Arabidopsis thaliana	RGAASNTTCTAGAAN	NTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFA1E_colamp_a	0.389	0.690
HSFB3 M06937_2.00	Arabidopsis thaliana	RRAANMWTCTAGAAV	BTTCTAGAWKNTTYY	Dap-seq OMalley et al.(2016) HSFB3_col_a	0.384	0.644
HSFB3 M06938_2.00	Arabidopsis thaliana	AABSTTCTAGAAN	NTTCTAGAASVTT	Dap-seq OMalley et al.(2016) HSFB3_colamp_a	0.384	0.644
HSFA1B M06948_2.00	Arabidopsis thaliana	GAANNTTCTAGA	TCTAGAANNTTC	Dap-seq OMalley et al.(2016) HSF3_col_a	0.371	0.678
HSFA1B M06949_2.00	Arabidopsis thaliana	TTCYRG	CYRGAA	Dap-seq OMalley et al.(2016) HSF3_colamp_a	0.371	0.678
HSFA6B M06941_2.00	Arabidopsis thaliana	RGAASNTTCTAGA	TCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFA6B_colamp_a	0.370	0.644
HSFA6B M06942_2.00	Arabidopsis thaliana	RGAABNTTCTRGAAN	NTTCYAGAANVTTCY	Dap-seq OMalley et al.(2016) HSFA6B_col	0.370	0.644
HSFA6A M06950_2.00	Arabidopsis thaliana	GAASNTTCTAGAANNW	WNNTTCTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFA6A_col_a	0.360	0.575
HSFA6A M06951_2.00	Arabidopsis thaliana	GAASNTTCTAGAA	TTCTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFA6A_colamp_a	0.360	0.575
For this family, TFs with SR scores > 0.318* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
AES94709	HSF	10	100	FLLKTYQMVDDLATDDVISWSESGESFVVWKHADFARDLLPKYFKHNNFSSFVRQLNTYGFRKLVPDKWEFSNENFKRNHKHLLTDIKRRK

Links
Other HSF family TFs
Other *Medicago truncatula* TFs

1471 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
AGABI2DRAFT_182895	Agaricus bisporus	AGABI2DRAFT_182895	N
CERSUDRAFT_134561	Ceriporiopsis subvermispora	CERSUDRAFT_134561	N
CY34DRAFT_373712	Suillus luteus	CY34DRAFT_373712	N
fgenesh1_pg.C_scaffold_5000648	Phanerochaete chrysosporium	fgenesh1_pg.C_scaffold_5000648	N
GALMADRAFT_925642	Galerina marginata	GALMADRAFT_925642	N
GLOTRDRAFT_136618	Gloeophyllum trabeum	GLOTRDRAFT_136618	N
GYMLUDRAFT_251419	Gymnopus luxurians	GYMLUDRAFT_251419	N
GYMLUDRAFT_83464	Gymnopus luxurians	GYMLUDRAFT_83464	N
HETIRDRAFT_425252	Heterobasidion irregulare	HETIRDRAFT_425252	N
JAAARDRAFT_588666	Jaapia argillacea	JAAARDRAFT_588666	N
K443DRAFT_6025	Laccaria amethystina	K443DRAFT_6025	N
LACBIDRAFT_294648	Laccaria bicolor	LACBIDRAFT_294648	N
M378DRAFT_185784	Amanita muscaria	M378DRAFT_185784	N
M404DRAFT_26425	Pisolithus tinctorius	M404DRAFT_26425	N
M407DRAFT_81803	Tulasnella calospora	M407DRAFT_81803	N
Moror_10649	Moniliophthora roreri	Moror_10649	N
Moror_9135	Moniliophthora roreri	Moror_9135	N
Moror_9745	Moniliophthora roreri	Moror_9745	N
PAXRUDRAFT_640097	Paxillus rubicundulus	PAXRUDRAFT_640097	N
PHACADRAFT_255141	Phanerochaete carnosa	PHACADRAFT_255141	N
PHLGIDRAFT_38191	Phlebiopsis gigantea	PHLGIDRAFT_38191	N
PLEOSDRAFT_1110294	Pleurotus ostreatus	PLEOSDRAFT_1110294	N
SCHCODRAFT_84691	Schizophyllum commune	SCHCODRAFT_84691	N
SERLA73DRAFT_187008	Serpula lacrymans	SERLA73DRAFT_187008	N

MTR_5g017470 (Medicago truncatula) HSF

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1471 Related TFs

MTR_5g017470 **(Medicago truncatula)
HSF**