OGLUM06G19290 (Oryza glumaepatula)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 OGLUM06G19290 T241407_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFC1
M00868_2.00 		Arabidopsis thaliana
NDTCBNNN
NNNVGAHN		 PBM
Franco-Zorrilla et al.(2014)
HSFC1 		0.455 0.736
HSFC1
M06943_2.00 		Arabidopsis thaliana
GAASNTTCTAG
CTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFC1_col_a 		0.455 0.736
HSFC1
M06944_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAANVW
WBNTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a 		0.455 0.736
HSFB4
M06936_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFB4_col_a 		0.391 0.621
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.387 0.621
HSFA6B
M06941_2.00 		Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a 		0.382 0.724
HSFA6B
M06942_2.00 		Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_col 		0.382 0.724
HSFA6A
M06950_2.00 		Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_col_a 		0.368 0.598
HSFA6A
M06951_2.00 		Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a 		0.368 0.598
HSFB2A
M00869_2.00 		Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN		 PBM
Franco-Zorrilla et al.(2014)
HSFB2A 		0.366 0.621
HSFB2A
M06952_2.00 		Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF6_col_a 		0.366 0.621
HSFB2B
M06945_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_col_a 		0.363 0.609
HSFB2B
M06946_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_colamp_a 		0.363 0.609
HSFB3
M06937_2.00 		Arabidopsis thaliana
RRAANMWTCTAGAAV
BTTCTAGAWKNTTYY		 Dap-seq
OMalley et al.(2016)
HSFB3_col_a 		0.361 0.598
HSFB3
M06938_2.00 		Arabidopsis thaliana
AABSTTCTAGAAN
NTTCTAGAASVTT		 Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a 		0.361 0.598
HSFA1E
M06939_2.00 		Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_col_a 		0.345 0.678
HSFA1E
M06940_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a 		0.345 0.678
HSFA1B
M06948_2.00 		Arabidopsis thaliana
GAANNTTCTAGA
TCTAGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF3_col_a 		0.331 0.690
HSFA1B
M06949_2.00 		Arabidopsis thaliana
TTCYRG
CYRGAA		 Dap-seq
OMalley et al.(2016)
HSF3_colamp_a 		0.331 0.690
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM06G19290.1 HSF 12 137

Links

Other HSF family TFs
Other Oryza glumaepatula TFs

1342 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R000701 Calypte anna Aan_R000701 N
Afo_R002412 Aptenodytes forsteri Afo_R002412 N
Alligator_sinensis_CCG003108.1 Alligator sinensis Alligator_sinensis_CCG003108.1 N
Brh_R006311 Buceros rhinoceros Brh_R006311 N
Cmyd_10015463 Chelonia mydas Cmyd_10015463 N
ENSAMEG00000011882 Ailuropoda melanoleuca ENSAMEG00000011882 N
ENSAPLG00000006218 Anas platyrhynchos ENSAPLG00000006218 N
GATAD2A Bos taurus ENSBTAG00000003034 N
GATAD2A Canis familiaris ENSCAFG00000014267 N
GATAD2A Cavia porcellus ENSCPOG00000015396 N
GATAD2A Dasypus novemcinctus ENSDNOG00000041689 N
Gatad2a Dipodomys ordii ENSDORG00000008536 N
GATAD2A Equus caballus ENSECAG00000012875 N
ENSFALG00000009125 Ficedula albicollis ENSFALG00000009125 N
GATAD2A Felis catus ENSFCAG00000014327 N
gatad2ab Gasterosteus aculeatus ENSGACG00000013045 N
ENSGALG00000002928 Gallus gallus ENSGALG00000002928 N
ENSGMOG00000007431 Gadus morhua ENSGMOG00000007431 N
ENSLACG00000008883 Latimeria chalumnae ENSLACG00000008883 N
ENSLOCG00000004919 Lepisosteus oculatus ENSLOCG00000004919 N
GATAD2A Meleagris gallopavo ENSMGAG00000004036 N
GATAD2A Myotis lucifugus ENSMLUG00000017364 N
GATAD2A Monodelphis domestica ENSMODG00000007189 N
ENSMPUG00000015399 Mustela putorius furo ENSMPUG00000015399 N
GATAD2A Ornithorhynchus anatinus ENSOANG00000006409 N
ENSOARG00000007874 Ovis aries ENSOARG00000007874 N
GATAD2A Oryctolagus cuniculus ENSOCUG00000017513 N
ENSONIG00000002454 Oreochromis niloticus ENSONIG00000002454 N
gatad2ab Oryzias latipes ENSORLG00000000720 N
ENSP00000384899-D1 Bos grunniens ENSP00000384899-D1 N
ENSPFOG00000002553 Poecilia formosa ENSPFOG00000002553 N
ENSPFOG00000003089 Poecilia formosa ENSPFOG00000003089 N
ENSPMAG00000000934 Petromyzon marinus ENSPMAG00000000934 N
ENSPSIG00000015717 Pelodiscus sinensis ENSPSIG00000015717 N
GATAD2A Sorex araneus ENSSARG00000005282 N
ENSSHAG00000013178 Sarcophilus harrisii ENSSHAG00000013178 N
GATAD2A Sus scrofa ENSSSCG00000013938 N
ENSSTOG00000022640 Ictidomys tridecemlineatus ENSSTOG00000022640 N
GATAD2A Tupaia belangeri ENSTBEG00000015854 N
GATAD2A Taeniopygia guttata ENSTGUG00000013885 N
gatad2ab Tetraodon nigroviridis ENSTNIG00000013200 N
gatad2ab Takifugu rubripes ENSTRUG00000018122 N
GATAD2A Tursiops truncatus ENSTTRG00000009875 N
GATAD2A Vicugna pacos ENSVPAG00000003278 N
ENSXMAG00000012323 Xiphophorus maculatus ENSXMAG00000012323 N
Gfo_R007527 Geospiza fortis Gfo_R007527 N
Myotis_brandtii_GATAD2A_10018560 Myotis brandtii Myotis_brandtii_GATAD2A_10018560 N
Ogr08049 Ophisaurus gracilis Ogr08049 N
Pvit_05963 Pogona vitticeps Pvit_05963 N
Tal_R009898 Tyto alba Tal_R009898 N
gatad2a Xenopus tropicalis XB-GENE-1015730 N
gatad2a.L Xenopus laevis XB-GENE-1015735 N