POPTR_0005s23640 (Populus trichocarpa)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 POPTR_0005s23640 T241848_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFA6B
M06941_2.00 		Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a 		0.502 0.759
HSFA6B
M06942_2.00 		Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_col 		0.502 0.759
HSFA6A
M06950_2.00 		Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_col_a 		0.450 0.690
HSFA6A
M06951_2.00 		Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a 		0.450 0.690
HSFA1B
M06948_2.00 		Arabidopsis thaliana
GAANNTTCTAGA
TCTAGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF3_col_a 		0.439 0.736
HSFA1B
M06949_2.00 		Arabidopsis thaliana
TTCYRG
CYRGAA		 Dap-seq
OMalley et al.(2016)
HSF3_colamp_a 		0.439 0.736
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.420 0.667
HSFA1E
M06939_2.00 		Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_col_a 		0.414 0.701
HSFA1E
M06940_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a 		0.414 0.701
HSFB2A
M00869_2.00 		Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN		 PBM
Franco-Zorrilla et al.(2014)
HSFB2A 		0.394 0.644
HSFB2A
M06952_2.00 		Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF6_col_a 		0.394 0.644
HSFB4
M06936_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFB4_col_a 		0.391 0.690
HSFB2B
M06945_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_col_a 		0.378 0.632
HSFB2B
M06946_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_colamp_a 		0.378 0.632
HSFC1
M00868_2.00 		Arabidopsis thaliana
NDTCBNNN
NNNVGAHN		 PBM
Franco-Zorrilla et al.(2014)
HSFC1 		0.373 0.667
HSFC1
M06943_2.00 		Arabidopsis thaliana
GAASNTTCTAG
CTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFC1_col_a 		0.373 0.667
HSFC1
M06944_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAANVW
WBNTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a 		0.373 0.667
HSFB3
M06937_2.00 		Arabidopsis thaliana
RRAANMWTCTAGAAV
BTTCTAGAWKNTTYY		 Dap-seq
OMalley et al.(2016)
HSFB3_col_a 		0.358 0.586
HSFB3
M06938_2.00 		Arabidopsis thaliana
AABSTTCTAGAAN
NTTCTAGAASVTT		 Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a 		0.358 0.586
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s23640.1 HSF 46 136

Links

Other HSF family TFs
Other Populus trichocarpa TFs

1407 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_005020 Acremonium chrysogenum ACRE_005020 N
BBA_03169 Beauveria bassiana BBA_03169 N
CGGC5_12213 Colletotrichum gloeosporioides CGGC5_12213 N
CH063_13702 Colletotrichum higginsianum CH063_13702 N
CHGG_10362 Chaetomium globosum CHGG_10362 N
CMQ_4592 Grosmannia clavigera CMQ_4592 N
CSUB01_09744 Colletotrichum sublineola CSUB01_09744 N
F503_04378 Ophiostoma piceae uamh F503_04378 N
FFUJ_00815 Fusarium fujikuroi FFUJ_00815 N
fgenesh1_pm.sca_1_chr1_3_0000360 Nectria haematococca fgenesh1_pm.sca_1_chr1_3_0000360 N
FGRRES_00313 Fusarium graminearum FGRRES_00313 N
FOXG_00755 Fusarium oxysporum FOXG_00755 N
FPSE_08788 Fusarium pseudograminearum FPSE_08788 N
FVEG_00760 Fusarium verticillioides FVEG_00760 N
GGTG_12994 Gaeumannomyces graminis GGTG_12994 N
HMPREF1624_03405 Sporothrix schenckii HMPREF1624_03405 N
MAC_05634 Metarhizium acridum MAC_05634 N
MAM_00980 Metarhizium album MAM_00980 N
MANI_028774 Metarhizium anisopliae MANI_028774 N
MBR_05136 Metarhizium brunneum MBR_05136 N
MGU_01536 Metarhizium guizhouense MGU_01536 N
MGU_08873 Metarhizium guizhouense MGU_08873 N
MGU_09482 Metarhizium guizhouense MGU_09482 N
NechaG90227 Fusarium solani NechaG90227 N
PODANS_3_6620 Podospora anserina PODANS_3_6620 N
S40285_03373 Stachybotrys chlorohalonata S40285_03373 N
S40288_05293 Stachybotrys chartarum S40288_05293 N
SPBR_01442 Sporothrix brasiliensis SPBR_01442 N
THITE_2124406 Thielavia terrestris THITE_2124406 N
TRIREDRAFT_73792 Trichoderma reesei TRIREDRAFT_73792 N
TRIVIDRAFT_208477 Trichoderma virens TRIVIDRAFT_208477 N
VDAG_06781 Verticillium dahliae VDAG_06781 N
VDBG_07138 Verticillium alfalfae VDBG_07138 N
VDBG_07138 Verticillium albo atrum VDBG_07138 N
X797_006938 Metarhizium robertsii X797_006938 N
X797_011022 Metarhizium robertsii X797_011022 N