orange1.1g046676m.g (Citrus sinensis)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 orange1.1g046676m.g T243314_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFC1
M00868_2.00 		Arabidopsis thaliana
NDTCBNNN
NNNVGAHN		 PBM
Franco-Zorrilla et al.(2014)
HSFC1 		0.457 0.678
HSFC1
M06943_2.00 		Arabidopsis thaliana
GAASNTTCTAG
CTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFC1_col_a 		0.457 0.678
HSFC1
M06944_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAANVW
WBNTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a 		0.457 0.678
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.449 0.667
HSFA6B
M06941_2.00 		Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a 		0.448 0.701
HSFA6B
M06942_2.00 		Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_col 		0.448 0.701
HSFB4
M06936_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFB4_col_a 		0.444 0.690
HSFA1E
M06939_2.00 		Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_col_a 		0.435 0.667
HSFA1E
M06940_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a 		0.435 0.667
HSFA1B
M06948_2.00 		Arabidopsis thaliana
GAANNTTCTAGA
TCTAGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF3_col_a 		0.434 0.690
HSFA1B
M06949_2.00 		Arabidopsis thaliana
TTCYRG
CYRGAA		 Dap-seq
OMalley et al.(2016)
HSF3_colamp_a 		0.434 0.690
HSFB2B
M06945_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_col_a 		0.425 0.632
HSFB2B
M06946_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_colamp_a 		0.425 0.632
HSFB2A
M00869_2.00 		Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN		 PBM
Franco-Zorrilla et al.(2014)
HSFB2A 		0.424 0.621
HSFB2A
M06952_2.00 		Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF6_col_a 		0.424 0.621
HSFA6A
M06950_2.00 		Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_col_a 		0.412 0.667
HSFA6A
M06951_2.00 		Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a 		0.412 0.667
HSFB3
M06937_2.00 		Arabidopsis thaliana
RRAANMWTCTAGAAV
BTTCTAGAWKNTTYY		 Dap-seq
OMalley et al.(2016)
HSFB3_col_a 		0.409 0.644
HSFB3
M06938_2.00 		Arabidopsis thaliana
AABSTTCTAGAAN
NTTCTAGAASVTT		 Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a 		0.409 0.644
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g046676m HSF 71 161

Links

Other HSF family TFs
Other Citrus sinensis TFs

1476 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29647.m002101 Ricinus communis 29647.m002101 I
29827.m002528 Ricinus communis 29827.m002528 I
AMTR_s00002p00225810 Amborella trichopoda AMTR_s00002p00225810 I
AMTR_s00025p00048410 Amborella trichopoda AMTR_s00025p00048410 I
Aquca_026_00421 Aquilegia coerulea Aquca_026_00421 I
Aquca_054_00130 Aquilegia coerulea Aquca_054_00130 I
BGIOSGA026551 Oryza indica BGIOSGA026551 I
BGIOSGA029426 Oryza indica BGIOSGA029426 I
BGIOSGA033493 Oryza indica BGIOSGA033493 I
BRADI1G54070 Brachypodium distachyon BRADI1G54070 I
BRADI3G34200 Brachypodium distachyon BRADI3G34200 I
BRADI4G35400 Brachypodium distachyon BRADI4G35400 N
cassava24625.valid.m1 Manihot esculenta cassava24625.valid.m1 I
cassava29522.valid.m1 Manihot esculenta cassava29522.valid.m1 I
cassava45205.m1 Manihot esculenta cassava45205.m1 I
cassava8764.m1 Manihot esculenta cassava8764.m1 I
Ca_07836 Cicer arietinum Ca_07836 I
Ciclev10011214m.g Citrus clementina Ciclev10011214m.g I
Ciclev10019118m.g Citrus clementina Ciclev10019118m.g I
Cla016454 Citrullus lanatus Cla016454 I
Cucsa.313090 Cucumis sativus Cucsa.313090 I
Eucgr.H01487 Eucalyptus grandis Eucgr.H01487 I
evm.TU.supercontig_71.72 Carica papaya evm.TU.supercontig_71.72 I
F775_01879 Aegilops tauschii F775_01879 N
gene27827-v1.0-hybrid Fragaria vesca gene27827-v1.0-hybrid I
GLYMA02G16670 Glycine max GLYMA02G16670 I
GLYMA03G30940 Glycine max GLYMA03G30940 I
GLYMA10G03140 Glycine max GLYMA10G03140 I
Gorai.004G129600 Gossypium raimondii Gorai.004G129600 I
Gorai.004G215900 Gossypium raimondii Gorai.004G215900 I
Gorai.007G136400 Gossypium raimondii Gorai.007G136400 I
GRMZM2G001930 Zea mays GRMZM2G001930 I
GRMZM2G013688 Zea mays GRMZM2G013688 I
GRMZM2G038479 Zea mays GRMZM2G038479 I
GRMZM2G049229 Zea mays GRMZM2G049229 I
GRMZM2G107560 Zea mays GRMZM2G107560 I
GRMZM2G472671 Zea mays GRMZM2G472671 N
GSMUA_Achr11G17840_001 Musa acuminata GSMUA_Achr11G17840_001 I
GSMUA_Achr2G18140_001 Musa acuminata GSMUA_Achr2G18140_001 I
GSMUA_Achr3G17620_001 Musa acuminata GSMUA_Achr3G17620_001 I
GSMUA_Achr4G16980_001 Musa acuminata GSMUA_Achr4G16980_001 I
GSMUA_Achr6G21490_001 Musa acuminata GSMUA_Achr6G21490_001 I
GSMUA_Achr7G04720_001 Musa acuminata GSMUA_Achr7G04720_001 I
GSMUA_Achr8G14720_001 Musa acuminata GSMUA_Achr8G14720_001 I
GSMUA_AchrUn_randomG02900_001 Musa acuminata GSMUA_AchrUn_randomG02900_001 I
LPERR03G22350 Leersia perrieri LPERR03G22350 I
LPERR09G12780 Leersia perrieri LPERR09G12780 I
LPERR10G15300 Leersia perrieri LPERR10G15300 I
Lus10005999.g Linum usitatissimum Lus10005999.g I
Lus10030970.g Linum usitatissimum Lus10030970.g I
MDP0000160600 Malus domestica MDP0000160600 I
MDP0000225680 Malus domestica MDP0000225680 I
MDP0000617077 Malus domestica MDP0000617077 I
MLOC_40535 Hordeum vulgare MLOC_40535 N
MLOC_71611 Hordeum vulgare MLOC_71611 I
MTR_1g072320 Medicago truncatula MTR_1g072320 I
OGLUM08G23650 Oryza glumaepatula OGLUM08G23650 I
OGLUM09G17250 Oryza glumaepatula OGLUM09G17250 I
OGLUM10G19510 Oryza glumaepatula OGLUM10G19510 I
OLONG_011820 Oryza longistaminata OLONG_011820 I
OMERI08G17270 Oryza meridionalis OMERI08G17270 I
ONIVA08G25370 Oryza nivara ONIVA08G25370 I
ONIVA09G17720 Oryza nivara ONIVA09G17720 I
ONIVA10G22030 Oryza nivara ONIVA10G22030 I
OPUNC10G17860 Oryza punctata OPUNC10G17860 I
orange1.1g005651m.g Citrus sinensis orange1.1g005651m.g I
orange1.1g037798m.g Citrus sinensis orange1.1g037798m.g I
ORGLA08G0221300 Oryza glaberrima ORGLA08G0221300 I
ORGLA09G0131400 Oryza glaberrima ORGLA09G0131400 I
ORGLA10G0146100 Oryza glaberrima ORGLA10G0146100 I
ORUFI08G24840 Oryza rufipogon ORUFI08G24840 I
ORUFI09G17940 Oryza rufipogon ORUFI09G17940 I
ORUFI10G20700 Oryza rufipogon ORUFI10G20700 I
OS08G0543700 Oryza sativa OS08G0543700 I
OS09G0519100 Oryza sativa OS09G0519100 I
MYC2 Oryza sativa OS10G0575000 I
Pavir.Ba01305 Panicum virgatum Pavir.Ba01305 I
Pavir.Ba01307 Panicum virgatum Pavir.Ba01307 I
Pavir.Fa00118 Panicum virgatum Pavir.Fa00118 N
Pavir.Fb00905 Panicum virgatum Pavir.Fb00905 N
Pavir.Fb02191 Panicum virgatum Pavir.Fb02191 N
Pavir.Ia03512 Panicum virgatum Pavir.Ia03512 I
Pavir.J01049 Panicum virgatum Pavir.J01049 I
Pavir.J27331 Panicum virgatum Pavir.J27331 N
Pavir.J28686 Panicum virgatum Pavir.J28686 I
Pavir.J38781 Panicum virgatum Pavir.J38781 I
Pavir.J40111 Panicum virgatum Pavir.J40111 I
PGSC0003DMG400012891 Solanum tuberosum PGSC0003DMG400012891 I
PK09702.1 Cannabis sativa PK09702.1 D
Pm020164 Prunus mume Pm020164 I
POPTR_0001s02450 Populus trichocarpa POPTR_0001s02450 I
POPTR_0005s23020 Populus trichocarpa POPTR_0005s23020 I
PRUPE_ppa002884m2g Prunus persica PRUPE_ppa002884m2g I
SapurV1A.0076s0350 Salix purpurea SapurV1A.0076s0350 I
SapurV1A.0741s0050 Salix purpurea SapurV1A.0741s0050 I
Sb01g028230 Sorghum bicolor Sb01g028230 I
Sb02g006390 Sorghum bicolor Sb02g006390 I
Sb02g030110 Sorghum bicolor Sb02g030110 I
Sb02g030120 Sorghum bicolor Sb02g030120 I
Sb07g025310 Sorghum bicolor Sb07g025310 I
Sb07g025330 Sorghum bicolor Sb07g025330 N
Sb07g025340 Sorghum bicolor Sb07g025340 N
Sb2273s002010 Sorghum bicolor Sb2273s002010 N
Si014241m.g Setaria italica Si014241m.g N
Si015024m.g Setaria italica Si015024m.g N
Si015026m.g Setaria italica Si015026m.g N
Si015213m.g Setaria italica Si015213m.g N
Si015343m.g Setaria italica Si015343m.g N
Si015513m.g Setaria italica Si015513m.g I
Si029106m.g Setaria italica Si029106m.g I
Si031900m.g Setaria italica Si031900m.g I
Si032741m.g Setaria italica Si032741m.g I
Si039973m.g Setaria italica Si039973m.g I
Solyc09g065100.1 Solanum lycopersicum Solyc09g065100.1 I
TCM_004403 Theobroma cacao TCM_004403 I
TCM_015714 Theobroma cacao TCM_015714 I
Thhalv10028584m.g Eutrema salsugineum Thhalv10028584m.g I
Traes_2BL_F38E03233 Triticum aestivum Traes_2BL_F38E03233 N
Traes_2BL_F38E032331 Triticum aestivum Traes_2BL_F38E032331 N
Traes_5BL_C753673FD Triticum aestivum Traes_5BL_C753673FD N
Traes_5BL_D45BBFEBC Triticum aestivum Traes_5BL_D45BBFEBC N
Traes_5BL_E86F89671 Triticum aestivum Traes_5BL_E86F89671 N
Traes_5DL_5DA6E1A09 Triticum aestivum Traes_5DL_5DA6E1A09 N
Traes_5DL_F32936F9C Triticum aestivum Traes_5DL_F32936F9C N
TRIUR3_29141 Triticum urartu TRIUR3_29141 N
VIT_02s0012g01320 Vitis vinifera VIT_02s0012g01320 I
TT8 Vitis vinifera VIT_07s0104g00090 I