CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0182s0110
(
Salix purpurea
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
SapurV1A.0182s0110
T243381_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HSFA1E
M06939_2.00
Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSFA1E_col_a
0.543
0.862
HSFA1E
M06940_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a
0.543
0.862
HSFA1B
M06948_2.00
Arabidopsis thaliana
GAANNTTCTAGA
TCTAGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF3_col_a
0.510
0.839
HSFA1B
M06949_2.00
Arabidopsis thaliana
TTCYRG
CYRGAA
Dap-seq
OMalley et al.(2016)
HSF3_colamp_a
0.510
0.839
HSFA6B
M06941_2.00
Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a
0.442
0.724
HSFA6B
M06942_2.00
Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY
Dap-seq
OMalley et al.(2016)
HSFA6B_col
0.442
0.724
HSFA4A
M06947_2.00
Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN
Dap-seq
OMalley et al.(2016)
HSF21_col_a
0.441
0.690
HSFB4
M06936_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFB4_col_a
0.412
0.690
HSFB2A
M00869_2.00
Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN
PBM
Franco-Zorrilla et al.(2014)
HSFB2A
0.396
0.632
HSFB2A
M06952_2.00
Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF6_col_a
0.396
0.632
HSFB2B
M06945_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_col_a
0.383
0.644
HSFB2B
M06946_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_colamp_a
0.383
0.644
HSFA6A
M06950_2.00
Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFA6A_col_a
0.380
0.598
HSFA6A
M06951_2.00
Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a
0.380
0.598
HSFB3
M06937_2.00
Arabidopsis thaliana
RRAANMWTCTAGAAV
BTTCTAGAWKNTTYY
Dap-seq
OMalley et al.(2016)
HSFB3_col_a
0.366
0.598
HSFB3
M06938_2.00
Arabidopsis thaliana
AABSTTCTAGAAN
NTTCTAGAASVTT
Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a
0.366
0.598
HSFC1
M00868_2.00
Arabidopsis thaliana
NDTCBNNN
NNNVGAHN
PBM
Franco-Zorrilla et al.(2014)
HSFC1
0.361
0.644
HSFC1
M06943_2.00
Arabidopsis thaliana
GAASNTTCTAG
CTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFC1_col_a
0.361
0.644
HSFC1
M06944_2.00
Arabidopsis thaliana
RGAASNTTCTAGAANVW
WBNTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a
0.361
0.644
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0182s0110.1.p
HSF
14
104
FLSKTYDMVDDPLTDSVVSWSSSNNSFVVWNVPEFQTDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDRFEFANEGFLRGQKQLLRSIYRKK
SapurV1A.0182s0110.2.p
HSF
14
104
FLSKTYDMVDDPLTDSVVSWSSSNNSFVVWNVPEFQTDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDRFEFANEGFLRGQKQLLRSIYRKK
Links
Other
HSF
family TFs
Other
Salix purpurea
TFs
1450 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
27950.m000105
Ricinus communis
27950.m000105
I
28649.m000212
Ricinus communis
28649.m000212
I
CUC2
Arabidopsis lyrata
Al_scaffold_0008_1815
I
AMTR_s00010p00266320
Amborella trichopoda
AMTR_s00010p00266320
I
AMTR_s00058p00136280
Amborella trichopoda
AMTR_s00058p00136280
I
Aquca_002_00662
Aquilegia coerulea
Aquca_002_00662
I
NAC079
Arabidopsis thaliana
AT5G07680
D
NAC098
Arabidopsis thaliana
AT5G53950
D
NAC100
Arabidopsis thaliana
AT5G61430
D
BGIOSGA008492
Oryza indica
BGIOSGA008492
I
BGIOSGA016546
Oryza indica
BGIOSGA016546
I
BGIOSGA022861
Oryza indica
BGIOSGA022861
I
BGIOSGA029508
Oryza indica
BGIOSGA029508
I
Bo00578s090
Brassica oleracea
Bo00578s090
I
Bo2g043280
Brassica oleracea
Bo2g043280
I
Bo6g062160
Brassica oleracea
Bo6g062160
I
Bo9g113820
Brassica oleracea
Bo9g113820
I
Bostr.13129s0198
Boechera stricta
Bostr.13129s0198
I
Bostr.26833s0095
Boechera stricta
Bostr.26833s0095
I
Bostr.26833s0880
Boechera stricta
Bostr.26833s0880
I
Bra022685
Brassica rapa
Bra022685
I
Bra025658
Brassica rapa
Bra025658
I
Bra028435
Brassica rapa
Bra028435
I
BRADI3G46900
Brachypodium distachyon
BRADI3G46900
I
BRADI5G12407
Brachypodium distachyon
BRADI5G12407
I
Cagra.2925s0018
Capsella grandiflora
Cagra.2925s0018
I
Cagra.4622s0005
Capsella grandiflora
Cagra.4622s0005
I
Carubv10001372m.g
Capsella rubella
Carubv10001372m.g
I
Carubv10028330m.g
Capsella rubella
Carubv10028330m.g
I
cassava1757.valid.m1
Manihot esculenta
cassava1757.valid.m1
I
cassava1758.valid.m1
Manihot esculenta
cassava1758.valid.m1
I
cassava361.valid.m1
Manihot esculenta
cassava361.valid.m1
I
cassava44869.m1
Manihot esculenta
cassava44869.m1
I
Ca_22532
Cicer arietinum
Ca_22532
I
chr4.CM0087.800.nd
Lotus japonicus
chr4.CM0087.800.nd
I
Ciclev10008619m.g
Citrus clementina
Ciclev10008619m.g
I
Ciclev10012093m.g
Citrus clementina
Ciclev10012093m.g
I
Cla010484
Citrullus lanatus
Cla010484
I
Cla017258
Citrullus lanatus
Cla017258
I
Eucgr.B00529
Eucalyptus grandis
Eucgr.B00529
I
evm.TU.supercontig_111.22
Carica papaya
evm.TU.supercontig_111.22
I
evm.TU.supercontig_131.88
Carica papaya
evm.TU.supercontig_131.88
I
evm.TU.supercontig_14.101
Carica papaya
evm.TU.supercontig_14.101
I
e_gw1.159.34.1
Physcomitrella patens
e_gw1.159.34.1
D
F775_20638
Aegilops tauschii
F775_20638
I
F775_26964
Aegilops tauschii
F775_26964
N
ANAC080
Arabidopsis lyrata
fgenesh2_kg.6__736__AT5G07680.1
D
gene04424-v1.0-hybrid
Fragaria vesca
gene04424-v1.0-hybrid
I
GLYMA04G33270
Glycine max
GLYMA04G33270
I
GLYMA05G00930
Glycine max
GLYMA05G00930
I
GLYMA06G21020
Glycine max
GLYMA06G21020
I
GLYMA09G37050
Glycine max
GLYMA09G37050
I
GLYMA13G05540
Glycine max
GLYMA13G05540
I
GLYMA17G10970
Glycine max
GLYMA17G10970
I
GLYMA18G49620
Glycine max
GLYMA18G49620
I
Gorai.002G067300
Gossypium raimondii
Gorai.002G067300
I
Gorai.007G079900
Gossypium raimondii
Gorai.007G079900
I
Gorai.007G323900
Gossypium raimondii
Gorai.007G323900
I
Gorai.008G194400
Gossypium raimondii
Gorai.008G194400
I
Gorai.013G171300
Gossypium raimondii
Gorai.013G171300
I
GRMZM2G009892
Zea mays
GRMZM2G009892
I
GRMZM2G386163
Zea mays
GRMZM2G386163
I
GRMZM2G393433
Zea mays
GRMZM2G393433
I
GRMZM5G898290
Zea mays
GRMZM5G898290
N
GSMUA_Achr10G22350_001
Musa acuminata
GSMUA_Achr10G22350_001
I
GSMUA_Achr10G26180_001
Musa acuminata
GSMUA_Achr10G26180_001
I
GSMUA_Achr8G24680_001
Musa acuminata
GSMUA_Achr8G24680_001
I
LPERR02G17680
Leersia perrieri
LPERR02G17680
N
LPERR06G12840
Leersia perrieri
LPERR06G12840
I
LPERR09G11330
Leersia perrieri
LPERR09G11330
I
Lus10005537.g
Linum usitatissimum
Lus10005537.g
I
Lus10041924.g
Linum usitatissimum
Lus10041924.g
I
MDP0000129335
Malus domestica
MDP0000129335
I
MDP0000135860
Malus domestica
MDP0000135860
I
MDP0000232050
Malus domestica
MDP0000232050
I
MDP0000276765
Malus domestica
MDP0000276765
I
MDP0000310981
Malus domestica
MDP0000310981
I
MLOC_5832
Hordeum vulgare
MLOC_5832
N
MTR_2g078700
Medicago truncatula
MTR_2g078700
I
MTR_6g012670
Medicago truncatula
MTR_6g012670
I
OB02G29280
Oryza brachyantha
OB02G29280
N
OB04G22290
Oryza brachyantha
OB04G22290
I
OB06G22100
Oryza brachyantha
OB06G22100
I
OBART02G21850
Oryza barthii
OBART02G21850
I
OBART04G14970
Oryza barthii
OBART04G14970
I
OBART06G13940
Oryza barthii
OBART06G13940
I
OBART09G15220
Oryza barthii
OBART09G15220
I
OGLUM02G22030
Oryza glumaepatula
OGLUM02G22030
I
OGLUM04G14830
Oryza glumaepatula
OGLUM04G14830
I
OGLUM06G14810
Oryza glumaepatula
OGLUM06G14810
I
OGLUM09G15820
Oryza glumaepatula
OGLUM09G15820
I
OLONG_008218
Oryza longistaminata
OLONG_008218
I
OLONG_009674
Oryza longistaminata
OLONG_009674
I
OLONG_019251
Oryza longistaminata
OLONG_019251
I
OMERI02G21390
Oryza meridionalis
OMERI02G21390
I
OMERI07G04410
Oryza meridionalis
OMERI07G04410
I
ONIVA02G24080
Oryza nivara
ONIVA02G24080
I
ONIVA03G33370
Oryza nivara
ONIVA03G33370
I
ONIVA04G13100
Oryza nivara
ONIVA04G13100
I
ONIVA09G15800
Oryza nivara
ONIVA09G15800
I
OPUNC04G12870
Oryza punctata
OPUNC04G12870
I
OPUNC06G13130
Oryza punctata
OPUNC06G13130
I
OPUNC09G13640
Oryza punctata
OPUNC09G13640
I
orange1.1g018950m.g
Citrus sinensis
orange1.1g018950m.g
I
orange1.1g047710m.g
Citrus sinensis
orange1.1g047710m.g
I
ORGLA04G0119700
Oryza glaberrima
ORGLA04G0119700
I
ORGLA06G0124600
Oryza glaberrima
ORGLA06G0124600
I
ORGLA09G0117400
Oryza glaberrima
ORGLA09G0117400
I
ORUFI02G22930
Oryza rufipogon
ORUFI02G22930
I
ORUFI04G16370
Oryza rufipogon
ORUFI04G16370
I
ORUFI06G14810
Oryza rufipogon
ORUFI06G14810
I
ORUFI09G16430
Oryza rufipogon
ORUFI09G16430
I
OS02G0579000
Oryza sativa
OS02G0579000
I
OS04G0460600
Oryza sativa
OS04G0460600
I
OS06G0344900
Oryza sativa
OS06G0344900
I
OS09G0497900
Oryza sativa
OS09G0497900
I
Pavir.J00978
Panicum virgatum
Pavir.J00978
I
Pavir.J02772
Panicum virgatum
Pavir.J02772
I
Pavir.J23199
Panicum virgatum
Pavir.J23199
I
Pavir.J24971
Panicum virgatum
Pavir.J24971
N
PK13860.1
Cannabis sativa
PK13860.1
I
Pm011397
Prunus mume
Pm011397
I
Pm015914
Prunus mume
Pm015914
I
POPTR_0011s11600
Populus trichocarpa
POPTR_0011s11600
I
PRUPE_ppa007653mg
Prunus persica
PRUPE_ppa007653mg
I
PRUPE_ppa026810mg
Prunus persica
PRUPE_ppa026810mg
I
SapurV1A.1325s0010
Salix purpurea
SapurV1A.1325s0010
I
SapurV1A.2059s0010
Salix purpurea
SapurV1A.2059s0010
I
Sb02g028870
Sorghum bicolor
Sb02g028870
I
Sb08g006330
Sorghum bicolor
Sb08g006330
I
Si007886m.g
Setaria italica
Si007886m.g
I
Si010553m.g
Setaria italica
Si010553m.g
I
Si017567m.g
Setaria italica
Si017567m.g
N
Si030187m.g
Setaria italica
Si030187m.g
I
Solyc07g062840.2
Solanum lycopersicum
Solyc07g062840.2
I
TCM_014073
Theobroma cacao
TCM_014073
I
TCM_031619
Theobroma cacao
TCM_031619
I
Thhalv10013863m.g
Eutrema salsugineum
Thhalv10013863m.g
I
Thhalv10014081m.g
Eutrema salsugineum
Thhalv10014081m.g
I
Thhalv10027874m.g
Eutrema salsugineum
Thhalv10027874m.g
I
Traes_5BL_420974D47
Triticum aestivum
Traes_5BL_420974D47
N
Traes_7AL_74CC91D39
Triticum aestivum
Traes_7AL_74CC91D39
I
TRIUR3_14541
Triticum urartu
TRIUR3_14541
N