TCNE_0000949901 (Toxocara canis)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 TCNE_0000949901 T243726_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
hsf-1
M00682_2.00 		Caenorhabditis elegans
TTCYAGAA
TTCTRGAA		 PBM
Narasimhan et al.(2015)
pTH10796 		0.523 0.750
HSF4
M03325_2.00 		Homo sapiens
GAANNTTCBVGAA
TTCBVGAANNTTC		 SELEX
Jolma et al.(2013)
HSF4_1 		0.341 0.531
HSF4
M05509_2.00 		Homo sapiens
VGAABVTTCKVGAAN
NTTCBMGAABVTTCB		 SELEX
Yin et al.(2017)
HSF4_eDBD_HT-SELEX 		0.341 0.531
HSF4
M10862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF4_Q3 		0.341 0.531
HSF4
M05510_2.00 		Homo sapiens
RGAABVWDCYRGAWN
NWTCYRGHWBVTTCY		 SELEX
Yin et al.(2017)
HSF4_eDBD_Methyl-HT-SELEX 		0.341 0.531
HSF1
M03329_2.00 		Homo sapiens
GAANVTTCBVGAA
TTCBVGAABNTTC		 SELEX
Jolma et al.(2013)
HSF1_1 		0.330 0.542
HSF1
M03330_2.00 		Homo sapiens
GAANRTTCBAGAA
TTCTVGAAYNTTC		 SELEX
Jolma et al.(2013)
HSF1_2 		0.330 0.542
HSF1
M05523_2.00 		Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB		 SELEX
Yin et al.(2017)
HSF1_eDBD_HT-SELEX 		0.330 0.542
HSF1
M05525_2.00 		Homo sapiens
VGAANRTTCKVGAAN
NTTCBMGAAYNTTCB		 SELEX
Yin et al.(2017)
HSF1_FL_HT-SELEX 		0.330 0.542
HSF1
M07977_2.00 		Homo sapiens
GDCSYGGGTTCRADYCCC
GGGRHTYGAACCCRSGHC		 ChIP-seq
Gerstein et al.(2012)
HepG2_HSF1_Stanford 		0.330 0.542
HSF1
M09230_2.00 		Homo sapiens
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN		 Misc
Kulakovskiy et al.(2013)
HSF1_HUMAN.H11MO.0.A 		0.330 0.542
Hsf1
M09232_2.00 		Mus musculus
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN		 Misc
Kulakovskiy et al.(2013)
HSF1_MOUSE.H11MO.0.A 		0.330 0.542
HSF1
M09592_2.00 		Homo sapiens
NNBBCYRGAANNTTCYRGVV
BBCYRGAANNTTCYRGVVNN		 Misc
Heinz et al.(2010)
HepG2-HSF1_GSE31477 		0.330 0.542
Hsf1
M09593_2.00 		Mus musculus
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN		 Misc
Heinz et al.(2010)
Striatum-HSF1_GSE38000 		0.330 0.542
HSF1
M10863_2.00 		Homo sapiens
NGAAHNTTCY
RGAANDTTCN		 Transfac
Matys et al.(2006)
V$HSF1_01 		0.330 0.542
HSF1
M10864_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q5_01 		0.330 0.542
HSF1
M10865_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q5 		0.330 0.542
HSF1
M10866_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q6_01 		0.330 0.542
HSF1
M10867_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q6 		0.330 0.542
HSF1
M10868_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF_Q6 		0.330 0.542
HSF1
M05524_2.00 		Homo sapiens
RGAANRTTCYRGAWN
NWTCYRGAAYNTTCY		 SELEX
Yin et al.(2017)
HSF1_eDBD_Methyl-HT-SELEX 		0.330 0.542
HSF1
M05526_2.00 		Homo sapiens
RGAANVTTCYRGAWN
NWTCYRGAABNTTCY		 SELEX
Yin et al.(2017)
HSF1_FL_Methyl-HT-SELEX 		0.330 0.542
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TCNE_0000949901-mRNA-1 HSF 35 138

Links

Other HSF family TFs
Other Toxocara canis TFs

351 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30027.m000837 Ricinus communis 30027.m000837 N
AMTR_s00009p00257990 Amborella trichopoda AMTR_s00009p00257990 N
Ca_06925 Cicer arietinum Ca_06925 N
Ca_16645 Cicer arietinum Ca_16645 N
chr1.CM0600.130.nd Lotus japonicus chr1.CM0600.130.nd N
evm.TU.supercontig_111.24 Carica papaya evm.TU.supercontig_111.24 N
evm.TU.supercontig_1993.2 Carica papaya evm.TU.supercontig_1993.2 N
e_gw1.1.456.1 Physcomitrella patens e_gw1.1.456.1 N
e_gw1.2.476.1 Physcomitrella patens e_gw1.2.476.1 N
e_gw1.389.24.1 Physcomitrella patens e_gw1.389.24.1 N
GLYMA05G17994 Glycine max GLYMA05G17994 N
GRMZM2G051256 Zea mays GRMZM2G051256 I
GRMZM2G111045 Zea mays GRMZM2G111045 I
Lus10030442.g Linum usitatissimum Lus10030442.g N
mgf004018m Mimulus guttatus mgf004018m N
MLOC_18177 Hordeum vulgare MLOC_18177 I
MTR_5g007300 Medicago truncatula MTR_5g007300 N
ORGLA02G0218900 Oryza glaberrima ORGLA02G0218900 N
ORUFI06G25490 Oryza rufipogon ORUFI06G25490 N
OS08G0433400 Oryza sativa OS08G0433400 N
Pavir.Aa01543 Panicum virgatum Pavir.Aa01543 N
PDK_20s1698071g001 Phoenix dactylifera PDK_20s1698071g001 N
POPTR_0002s15900 Populus trichocarpa POPTR_0002s15900 N
SELMODRAFT_39454 Selaginella moellendorffii SELMODRAFT_39454 I
SELMODRAFT_39481 Selaginella moellendorffii SELMODRAFT_39481 I
SELMODRAFT_39496 Selaginella moellendorffii SELMODRAFT_39496 N
SELMODRAFT_39499 Selaginella moellendorffii SELMODRAFT_39499 N
SELMODRAFT_78303 Selaginella moellendorffii SELMODRAFT_78303 N
SELMODRAFT_78848 Selaginella moellendorffii SELMODRAFT_78848 N
SELMODRAFT_84608 Selaginella moellendorffii SELMODRAFT_84608 N
SELMODRAFT_89380 Selaginella moellendorffii SELMODRAFT_89380 N
SELMODRAFT_90153 Selaginella moellendorffii SELMODRAFT_90153 N
Traes_2BL_216652F6B Triticum aestivum Traes_2BL_216652F6B N
TRIUR3_30803 Triticum urartu TRIUR3_30803 N