IRF4 (Callithrix jacchus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSCJAG00000019524 T243984_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		1.000 1.000
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		1.000 1.000
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		1.000 1.000
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		1.000 1.000
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		1.000 1.000
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		1.000 1.000
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		1.000 1.000
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		1.000 1.000
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		1.000 1.000
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		1.000 1.000
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		1.000 1.000
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.990 0.990
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.990 0.990
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.810 0.810
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.810 0.810
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.810 0.810
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.810 0.810
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.810 0.810
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.810 0.810
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.810 0.810
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.810 0.810
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.810 0.810
Irf8
M09246_2.00 		Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A 		0.790 0.790
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000036266 IRF 23 128
ENSCJAP00000036268 IRF 23 128

Links

Other IRF family TFs
Other Callithrix jacchus TFs

157 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R011828 Aptenodytes forsteri Afo_R011828 N 0.000
Brh_R012327 Buceros rhinoceros Brh_R012327 N 0.000
Cmyd_10021484 Chelonia mydas Cmyd_10021484 N 0.000
NCOA1 Anolis carolinensis ENSACAG00000000619 N 0.000
ENSAMEG00000002653 Ailuropoda melanoleuca ENSAMEG00000002653 N 0.000
ENSAPLG00000013551 Anas platyrhynchos ENSAPLG00000013551 N 0.000
NCOA1 Bos taurus ENSBTAG00000015007 N 0.000
NCOA1 Canis familiaris ENSCAFG00000004075 N 0.000
NCOA1 Choloepus hoffmanni ENSCHOG00000004072 N 0.000
NCOA1 Callithrix jacchus ENSCJAG00000007912 N 0.000
NCOA1 Cavia porcellus ENSCPOG00000001117 N 0.000
ENSCSAG00000008479 Chlorocebus sabaeus ENSCSAG00000008479 N 0.000
NCOA1 Dasypus novemcinctus ENSDNOG00000009924 N 0.000
NCOA1 Equus caballus ENSECAG00000017819 N 0.000
NCOA1 Erinaceus europaeus ENSEEUG00000011176 N 0.000
ENSFALG00000010745 Ficedula albicollis ENSFALG00000010745 N 0.000
NCOA1 Homo sapiens ENSG00000084676 N 0.000
NCOA1 Gallus gallus ENSGALG00000016617 N 0.000
NCOA1 Gorilla gorilla ENSGGOG00000011279 N 0.000
NCOA1 Loxodonta africana ENSLAFG00000014442 N 0.000
NCOA1 Meleagris gallopavo ENSMGAG00000014153 N 0.000
NCOA1 Myotis lucifugus ENSMLUG00000014119 N 0.000
NCOA1 Macaca mulatta ENSMMUG00000020838 N 0.000
NCOA1 Monodelphis domestica ENSMODG00000015907 N 0.000
ENSMPUG00000014013 Mustela putorius furo ENSMPUG00000014013 N 0.000
Ncoa1 Mus musculus ENSMUSG00000020647 N 0.000
ENSNLEG00000000895 Nomascus leucogenys ENSNLEG00000000895 N 0.000
ENSOARG00000018040 Ovis aries ENSOARG00000018040 N 0.000
NCOA1 Oryctolagus cuniculus ENSOCUG00000015422 N 0.000
NCOA1 Otolemur garnettii ENSOGAG00000000754 N 0.000
ENSP00000320940-D1 Bos grunniens ENSP00000320940-D1 N 0.000
ENSP00000385216 Macaca fascicularis ENSP00000385216 N 0.000
ENSPANG00000016229 Papio anubis ENSPANG00000016229 N 0.000
ENSPPYG00000012598 Pongo abelii ENSPPYG00000012598 N 0.000
ENSPSIG00000007514 Pelodiscus sinensis ENSPSIG00000007514 N 0.000
NCOA1 Pan troglodytes ENSPTRG00000011715 N 0.000
NCOA1 Pteropus vampyrus ENSPVAG00000017511 N 0.000
Ncoa1 Rattus norvegicus ENSRNOG00000004068 N 0.000
NCOA1 Sorex araneus ENSSARG00000014416 N 0.000
ENSSHAG00000003234 Sarcophilus harrisii ENSSHAG00000003234 N 0.000
NCOA1 Sus scrofa ENSSSCG00000008581 N 0.000
ENSTSYG00000010360 Tarsius syrichta ENSTSYG00000010360 N 0.000
NCOA1 Tursiops truncatus ENSTTRG00000015113 N 0.000
Myotis_brandtii_NCOA1_10031247 Myotis brandtii Myotis_brandtii_NCOA1_10031247 N 0.000
Pvit_14468 Pogona vitticeps Pvit_14468 N 0.000
ncoa1 Xenopus tropicalis XB-GENE-494349 N 0.000