irf10 (Gasterosteus aculeatus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSGACG00000015123 T244092_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.733 0.733
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		0.733 0.733
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		0.733 0.733
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		0.733 0.733
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		0.733 0.733
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.733 0.733
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		0.733 0.733
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		0.733 0.733
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		0.733 0.733
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		0.733 0.733
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		0.733 0.733
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		0.733 0.733
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		0.733 0.733
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.705 0.705
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.705 0.705
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.705 0.705
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.705 0.705
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.705 0.705
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.705 0.705
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.705 0.705
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.705 0.705
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000019944 IRF 6 111

Links

Other IRF family TFs
Other Gasterosteus aculeatus TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL001925 Aedes aegypti AAEL001925 N 0.000
AALB005658 Anopheles albimanus AALB005658 N 0.000
AARA007828 Anopheles arabiensis AARA007828 N 0.000
AATE002182 Anopheles atroparvus AATE002182 N 0.000
ACEP16593 Atta cephalotes ACEP16593 N 0.000
ACHR006701 Anopheles christyi ACHR006701 N 0.000
ACOM025371 Anopheles coluzzii ACOM025371 N 0.000
ACYPI001044 Acyrthosiphon pisum ACYPI001044 N 0.000
ADIR007954 Anopheles dirus ADIR007954 N 0.000
AEPI005047 Anopheles epiroticus AEPI005047 N 0.000
AFAF017055 Anopheles farauti AFAF017055 N 0.000
AFUN003930 Anopheles funestus AFUN003930 N 0.000
AGAP007178 Anopheles gambiae AGAP007178 N 0.000
AMEC019779 Anopheles melas AMEC019779 N 0.000
AMEM017655 Anopheles merus AMEM017655 N 0.000
AMIN010644 Anopheles minimus AMIN010644 N 0.000
AQUA002099 Anopheles quadriannulatus AQUA002099 N 0.000
ASIS021701 Anopheles sinensis ASIS021701 N 0.000
ASTEI02720 Anopheles stephensi ASTEI02720 N 0.000
BGIBMGA012698 Bombyx mori BGIBMGA012698 N 0.000
Cflo_07298--XP_396330.3_APIME Camponotus floridanus Cflo_07298--XP_396330.3_APIME N 0.000
CLEC006839 Cimex lectularius CLEC006839 N 0.000
CPIJ009909 Culex quinquefasciatus CPIJ009909 N 0.000
CpipJ_CPIJ009909 Culex pipiens CpipJ_CPIJ009909 N 0.000
DAPPUDRAFT_109629 Daphnia pulex DAPPUDRAFT_109629 N 0.000
GF10235 Drosophila ananassae FBgn0087276 N 0.000
GG14496 Drosophila erecta FBgn0106755 N 0.000
GH14579 Drosophila grimshawi FBgn0122055 N 0.000
GH22490 Drosophila grimshawi FBgn0129948 N 0.000
GI13904 Drosophila mojavensis FBgn0136658 N 0.000
GL22430 Drosophila persimilis FBgn0160022 N 0.000
GM14099 Drosophila sechellia FBgn0169028 N 0.000
GD13370 Drosophila simulans FBgn0185084 N 0.000
GJ11760 Drosophila virilis FBgn0199014 N 0.000
GK17628 Drosophila willistoni FBgn0219627 N 0.000
GE21684 Drosophila yakuba FBgn0238932 N 0.000
GA28320 Drosophila pseudoobscura FBgn0249682 N 0.000
Tet Drosophila melanogaster FBgn0263392 N 0.000
GB52555 Apis mellifera GB52555 N 0.000
HHAL006470-PA Halyomorpha halys HHAL006470-PA N 0.000
HMEL013359 Heliconius melpomene HMEL013359 N 0.000
Hsal_06375--XP_396330.3_APIME Harpegnathos saltator Hsal_06375--XP_396330.3_APIME N 0.000
ISCW023645 Ixodes scapularis ISCW023645 N 0.000
KGM_05165 Danaus plexippus KGM_05165 N 0.000
L798_15814 Zootermopsis nevadensis L798_15814 N 0.000
LCUP015162 Lucilia cuprina LCUP015162 N 0.000
LDEC020316 Leptinotarsa decemlineata LDEC020316 N 0.000
MDOA007787 Musca domestica MDOA007787 N 0.000
MESCA007735 Megaselia scalaris MESCA007735 N 0.000
NV14212 Nasonia vitripennis NV14212 N 0.000
PHUM058930 Pediculus humanus PHUM058930 N 0.000
RPRC001841 Rhodnius prolixus RPRC001841 N 0.000
SINV21580 Solenopsis invicta SINV21580 N 0.000
YQE_04891 Dendroctonus ponderosae YQE_04891 N 0.000