CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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IRF8
(
Ornithorhynchus anatinus
)
IRF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00605 (IRF)
IPR001346
ENSOANG00000003741
T244234_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
IRF8
M03335_2.00
Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD
SELEX
Jolma et al.(2013)
IRF8_1
0.971
0.971
IRF8
M03336_2.00
Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD
SELEX
Jolma et al.(2013)
IRF8_2
0.971
0.971
IRF8
M05541_2.00
Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX
0.971
0.971
IRF8
M05543_2.00
Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN
SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX
0.971
0.971
IRF8
M09236_2.00
Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN
Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B
0.971
0.971
Irf8
M09246_2.00
Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN
Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A
0.971
0.971
IRF8
M10890_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ICSBP_Q6
0.971
0.971
IRF8
M10891_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF8_Q6
0.971
0.971
IRF8
M05542_2.00
Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX
0.971
0.971
IRF8
M05544_2.00
Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX
0.971
0.971
Irf4
M00175_2.00
Mus musculus
NNNYGAWASN
NSTWTCRNNN
PBM
Badis et al.(2009)
Irf4_3476
0.798
0.798
IRF4
M03334_2.00
Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD
SELEX
Jolma et al.(2013)
IRF4_1
0.798
0.798
IRF4
M05539_2.00
Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN
SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX
0.798
0.798
IRF4
M07978_2.00
Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH
ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha
0.798
0.798
IRF4
M09235_2.00
Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN
Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A
0.798
0.798
Irf4
M09243_2.00
Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN
Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A
0.798
0.798
IRF4
M09595_2.00
Homo sapiens
HNYGAAASYD
HRSTTTCRND
Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465
0.798
0.798
IRF4
M10885_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_07
0.798
0.798
IRF4
M10886_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_08
0.798
0.798
IRF4
M10887_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_Q5_01
0.798
0.798
IRF4
M10888_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_Q5
0.798
0.798
IRF4
M10889_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF4_Q6
0.798
0.798
IRF4
M05540_2.00
Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN
SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX
0.798
0.798
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000005936
IRF
9
113
RLRQWLIEQIDSNMYSGLIWENDEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFKEGDKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRIV
Links
Other
IRF
family TFs
Other
Ornithorhynchus anatinus
TFs
164 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL002769
Aedes aegypti
AAEL002769
N
0.000
AALB003340
Anopheles albimanus
AALB003340
I
0.000
AALB003341
Anopheles albimanus
AALB003341
N
0.000
AARA009757
Anopheles arabiensis
AARA009757
I
0.000
AARA009758
Anopheles arabiensis
AARA009758
N
0.000
AATE019368
Anopheles atroparvus
AATE019368
N
0.000
ACEP10070
Atta cephalotes
ACEP10070
N
0.000
ACHR005874
Anopheles christyi
ACHR005874
N
0.000
ACHR007729
Anopheles christyi
ACHR007729
I
0.000
ACOC_0000703501
Angiostrongylus costaricensis
ACOC_0000703501
I
0.000
ACOM033416
Anopheles coluzzii
ACOM033416
N
0.000
ACUA003826
Anopheles culicifacies
ACUA003826
I
0.000
ACYPI001696
Acyrthosiphon pisum
ACYPI001696
I
0.000
ADIR006615
Anopheles dirus
ADIR006615
N
0.000
ADIR006616
Anopheles dirus
ADIR006616
I
0.000
AEPI001686
Anopheles epiroticus
AEPI001686
N
0.000
AEPI001687
Anopheles epiroticus
AEPI001687
I
0.000
AFAF012033
Anopheles farauti
AFAF012033
N
0.000
AFUN011260
Anopheles funestus
AFUN011260
N
0.000
AGAP004052
Anopheles gambiae
AGAP004052
N
0.000
AMAM016687
Anopheles maculatus
AMAM016687
N
0.000
AMEC020934
Anopheles melas
AMEC020934
N
0.000
AMEM000031
Anopheles merus
AMEM000031
N
0.000
AMIN002617
Anopheles minimus
AMIN002617
N
0.000
AMIN002618
Anopheles minimus
AMIN002618
I
0.000
ANCCAN_23624
Ancylostoma caninum
ANCCAN_23624
I
0.000
ANCCAN_24706
Ancylostoma caninum
ANCCAN_24706
I
0.000
ANCCEY_02877
Ancylostoma ceylanicum
ANCCEY_02877
I
0.000
ANCDUO_15205
Ancylostoma duodenale
ANCDUO_15205
I
0.000
AQUA008560
Anopheles quadriannulatus
AQUA008560
N
0.000
AQUA008561
Anopheles quadriannulatus
AQUA008561
I
0.000
ASTEI07078
Anopheles stephensi
ASTEI07078
I
0.000
ASTEI07079
Anopheles stephensi
ASTEI07079
N
0.000
ASU_00242
Ascaris suum
ASU_00242
I
0.000
A_05794
Schistosoma haematobium
A_05794
I
0.000
BGIBMGA005085
Bombyx mori
BGIBMGA005085
N
0.000
Bm5024
Brugia malayi
Bm5024
I
0.000
CapteG2449
Capitella teleta
CapteG2449
N
0.000
CBG22984
Caenorhabditis briggsae
CBG22984
I
0.000
Cflo_00868--XP_392355.3_APIME
Camponotus floridanus
Cflo_00868--XP_392355.3_APIME
I
0.000
CGI_10022026
Crassostrea gigas
CGI_10022026
N
0.000
CGOC_0000822101
Cylicostephanus goldi
CGOC_0000822101
I
0.000
CLEC000910
Cimex lectularius
CLEC000910
N
0.000
CPIJ004052
Culex quinquefasciatus
CPIJ004052
I
0.000
CPIJ004053
Culex quinquefasciatus
CPIJ004053
N
0.000
CpipJ_CPIJ004052
Culex pipiens
CpipJ_CPIJ004052
I
0.000
CpipJ_CPIJ004053
Culex pipiens
CpipJ_CPIJ004053
N
0.000
CRE23850
Caenorhabditis remanei
CRE23850
I
0.000
csin108622
Clonorchis sinensis
csin108622
N
0.000
D917_07791
Trichinella nativa
D917_07791
I
0.000
D918_02805
Trichuris suis
D918_02805
I
0.000
DAPPUDRAFT_290533
Daphnia pulex
DAPPUDRAFT_290533
I
0.000
DICVIV_00921
Dictyocaulus viviparus
DICVIV_00921
I
0.000
ECANG7_03959
Echinococcus canadensis
ECANG7_03959
N
0.000
ECPE_0000538001
Echinostoma caproni
ECPE_0000538001
N
0.000
EFV53283
Trichinella spiralis
EFV53283
I
0.000
EmuJ_000703400
Echinococcus multilocularis
EmuJ_000703400
N
0.000
pros
Drosophila melanogaster
FBgn0004595
N
0.000
pros
Drosophila simulans
FBgn0025030
N
0.000
pros
Drosophila virilis
FBgn0028753
N
0.000
GA14403
Drosophila pseudoobscura
FBgn0074431
N
0.000
GG18089
Drosophila erecta
FBgn0110306
N
0.000
GH21437
Drosophila grimshawi
FBgn0128899
N
0.000
GI22696
Drosophila mojavensis
FBgn0145423
N
0.000
GL11998
Drosophila persimilis
FBgn0149606
I
0.000
GM23939
Drosophila sechellia
FBgn0178804
N
0.000
GK11290
Drosophila willistoni
FBgn0213301
N
0.000
GE26090
Drosophila yakuba
FBgn0243130
N
0.000
GB55033
Apis mellifera
GB55033
N
0.000
HCOI02128500
Haemonchus contortus
HCOI02128500
I
0.000
Hsal_05147--XP_392355.3_APIME
Harpegnathos saltator
Hsal_05147--XP_392355.3_APIME
N
0.000
ISCW008733
Ixodes scapularis
ISCW008733
N
0.000
KGM_10139
Danaus plexippus
KGM_10139
N
0.000
LCUP011133
Lucilia cuprina
LCUP011133
N
0.000
LCUP011134
Lucilia cuprina
LCUP011134
I
0.000
LDEC004085
Leptinotarsa decemlineata
LDEC004085
N
0.000
LLOJ001671
Lutzomyia longipalpis
LLOJ001671
N
0.000
LOAG_14553
Loa loa
LOAG_14553
I
0.000
LotgiG183824
Lottia gigantea
LotgiG183824
N
0.000
MDOA008728
Musca domestica
MDOA008728
N
0.000
nAv.1.0.1.g04749
Acanthocheilonema viteae
nAv.1.0.1.g04749
I
0.000
NBR_0000066801
Nippostrongylus brasiliensis
NBR_0000066801
I
0.000
NECAME_07738
Necator americanus
NECAME_07738
I
0.000
nLs.2.1.2.g05095
Litomosoides sigmodontis
nLs.2.1.2.g05095
I
0.000
nOo.2.0.1.g10265
Onchocerca ochengi
nOo.2.0.1.g10265
I
0.000
nRc.2.0.1.g38267
Romanomermis culicivorax
nRc.2.0.1.g38267
N
0.000
NV15108
Nasonia vitripennis
NV15108
N
0.000
PHUM334550
Pediculus humanus
PHUM334550
I
0.000
PPAI010076
Phlebotomus papatasi
PPAI010076
I
0.000
PTRK_0001568700
Parastrongyloides trichosuri
PTRK_0001568700
I
0.000
RPRC009271
Rhodnius prolixus
RPRC009271
N
0.000
SBAD_0000068201
Soboliphyme baturini
SBAD_0000068201
I
0.000
SINV18378
Solenopsis invicta
SINV18378
I
0.000
SMAR007154
Strigamia maritima
SMAR007154
N
0.000
Smp_162760
Schistosoma mansoni
Smp_162760
N
0.000
SPAL_0001624500
Strongyloides papillosus
SPAL_0001624500
I
0.000
SSTP_0000359900
Strongyloides stercoralis
SSTP_0000359900
I
0.000
SVE_0442300
Strongyloides venezuelensis
SVE_0442300
I
0.000
SVUK_0000405601
Strongylus vulgaris
SVUK_0000405601
I
0.000
T265_07444
Opisthorchis viverrini
T265_07444
N
0.000
TC010596
Tribolium castaneum
TC010596
N
0.000
TELCIR_21732
Teladorsagia circumcincta
TELCIR_21732
I
0.000
TELCIR_22329
Teladorsagia circumcincta
TELCIR_22329
I
0.000
tetur02g12740
Tetranychus urticae
tetur02g12740
N
0.000
TMUE_s0183000500
Trichuris muris
TMUE_s0183000500
I
0.000
TsM_000259000
Taenia solium
TsM_000259000
N
0.000
TTRE_0000134301
Trichuris trichiura
TTRE_0000134301
I
0.000
WUBG_06449
Wuchereria bancrofti
WUBG_06449
I
0.000
YQE_10516
Dendroctonus ponderosae
YQE_10516
I
0.000