IRF1 (Pteropus vampyrus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSPVAG00000000430 T244355_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF1
M08142_2.00 		Homo sapiens
RWANNGAAASYGAAASYRNNN
NNNYRSTTTCRSTTTCNNTWY		 ChIP-seq
Mathelier et al.(2014)
MA0050.2 		1.000 1.000
IRF1
M09233_2.00 		Homo sapiens
NRAANNGAAASWGAAASHRN
NYDSTTTCWSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF1_HUMAN.H11MO.0.A 		1.000 1.000
Irf1
M09242_2.00 		Mus musculus
VRAANNGAAASYGAAASYVN
NBRSTTTCRSTTTCNNTTYB		 Misc
Kulakovskiy et al.(2013)
IRF1_MOUSE.H11MO.0.A 		1.000 1.000
IRF1
M09594_2.00 		Homo sapiens
GAAASTGAAASY
RSTTTCASTTTC		 Misc
Heinz et al.(2010)
PBMC-IRF1_GSE43036 		1.000 1.000
IRF1
M10879_2.00 		Homo sapiens
SAAAASYGAAASY
RSTTTCRSTTTTS		 Transfac
Matys et al.(2006)
V$IRF1_01 		1.000 1.000
IRF1
M10880_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_03 		1.000 1.000
IRF1
M10881_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_Q5 		1.000 1.000
IRF1
M10882_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_Q6 		1.000 1.000
Irf2
M00805_2.00 		Mus musculus
NDWNHGAAAV
BTTTCDNWHN		 PBM
Weirauch et al.(2013)
pTH2835 		0.800 0.800
IRF2
M05545_2.00 		Homo sapiens
NGAAAVYGAAAS
STTTCRBTTTCN		 SELEX
Yin et al.(2017)
IRF2_FL_HT-SELEX 		0.800 0.800
IRF2
M02691_2.00 		Homo sapiens
SGAAAGYGAAASYNWWHH
DDWWNRSTTTCRCTTTCS		 SELEX
Mathelier et al.(2014)
MA0051.1 		0.800 0.800
IRF2
M09237_2.00 		Homo sapiens
NRAANNGAAASYGAAASYRV
BYRSTTTCRSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF2_HUMAN.H11MO.0.A 		0.800 0.800
Irf2
M09245_2.00 		Mus musculus
NRAANNGAAASYGAAASYRV
BYRSTTTCRSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF2_MOUSE.H11MO.0.B 		0.800 0.800
IRF2
M09596_2.00 		Homo sapiens
NRAAVNRRAASB
VSTTYYNBTTYN		 Misc
Heinz et al.(2010)
Erythroblas-IRF2_GSE36985 		0.800 0.800
IRF2
M10892_2.00 		Homo sapiens
GAAAAGYGAAASY
RSTTTCRCTTTTC		 Transfac
Matys et al.(2006)
V$IRF2_01 		0.800 0.800
IRF2
M10893_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF2_Q6 		0.800 0.800
IRF2
M05546_2.00 		Homo sapiens
NGAAASYGAAAS
STTTCRSTTTCN		 SELEX
Yin et al.(2017)
IRF2_FL_Methyl-HT-SELEX 		0.800 0.800
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000000400 IRF 7 73

Links

Other IRF family TFs
Other Pteropus vampyrus TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC233853.1_FG002 Zea mays AC233853.1_FG002 N
Aquca_005_00119 Aquilegia coerulea Aquca_005_00119 N
BGIOSGA004481 Oryza indica BGIOSGA004481 N
BGIOSGA007886 Oryza indica BGIOSGA007886 N
BRADI2G06790 Brachypodium distachyon BRADI2G06790 N
BRADI3G09340 Brachypodium distachyon BRADI3G09340 N
cassava21652.m1 Manihot esculenta cassava21652.m1 N
Ca_12857 Cicer arietinum Ca_12857 N
Ciclev10008720m.g Citrus clementina Ciclev10008720m.g N
Cla023708 Citrullus lanatus Cla023708 N
Cucsa.122790 Cucumis sativus Cucsa.122790 N
evm.TU.supercontig_131.79 Carica papaya evm.TU.supercontig_131.79 N
F775_31528 Aegilops tauschii F775_31528 N
gene27194-v1.0-hybrid Fragaria vesca gene27194-v1.0-hybrid N
GLYMA13G34770 Glycine max GLYMA13G34770 N
Gorai.002G064900 Gossypium raimondii Gorai.002G064900 N
Gorai.013G172500 Gossypium raimondii Gorai.013G172500 N
GRMZM2G027976 Zea mays GRMZM2G027976 N
GRMZM2G052102 Zea mays GRMZM2G052102 N
GRMZM2G158313 Zea mays GRMZM2G158313 N
GSMUA_Achr6G26930_001 Musa acuminata GSMUA_Achr6G26930_001 N
GSMUA_Achr9G06540_001 Musa acuminata GSMUA_Achr9G06540_001 N
LPERR01G06720 Leersia perrieri LPERR01G06720 N
MDP0000133698 Malus domestica MDP0000133698 N
mgf003967m Mimulus guttatus mgf003967m N
MLOC_39203 Hordeum vulgare MLOC_39203 N
MLOC_66252 Hordeum vulgare MLOC_66252 N
MLOC_72368 Hordeum vulgare MLOC_72368 N
OB01G17130 Oryza brachyantha OB01G17130 N
OBART01G07120 Oryza barthii OBART01G07120 N
OBART01G31310 Oryza barthii OBART01G31310 N
OBART02G10550 Oryza barthii OBART02G10550 N
OGLUM01G08020 Oryza glumaepatula OGLUM01G08020 N
OGLUM01G35480 Oryza glumaepatula OGLUM01G35480 N
OGLUM02G10470 Oryza glumaepatula OGLUM02G10470 N
OLONG_003093 Oryza longistaminata OLONG_003093 N
OMERI01G28450 Oryza meridionalis OMERI01G28450 N
OMERI02G11410 Oryza meridionalis OMERI02G11410 N
ONIVA01G09160 Oryza nivara ONIVA01G09160 N
ONIVA01G35770 Oryza nivara ONIVA01G35770 N
ONIVA02G11660 Oryza nivara ONIVA02G11660 N
OPUNC01G06850 Oryza punctata OPUNC01G06850 N
OPUNC01G30390 Oryza punctata OPUNC01G30390 N
OPUNC02G09400 Oryza punctata OPUNC02G09400 N
orange1.1g037696m.g Citrus sinensis orange1.1g037696m.g N
ORGLA01G0254900 Oryza glaberrima ORGLA01G0254900 N
ORGLA02G0094900 Oryza glaberrima ORGLA02G0094900 N
ORUFI01G07680 Oryza rufipogon ORUFI01G07680 N
ORUFI01G34500 Oryza rufipogon ORUFI01G34500 N
ORUFI02G10470 Oryza rufipogon ORUFI02G10470 N
BZIP02 Oryza sativa OS01G0211800 N
BZIP06 Oryza sativa OS01G0756200 N
Pavir.Ab01112 Panicum virgatum Pavir.Ab01112 N
Pavir.Ea02752 Panicum virgatum Pavir.Ea02752 N
Pavir.Eb03400 Panicum virgatum Pavir.Eb03400 N
Pavir.J05339 Panicum virgatum Pavir.J05339 N
Pavir.J11397 Panicum virgatum Pavir.J11397 N
PGSC0003DMG400012436 Solanum tuberosum PGSC0003DMG400012436 N
PK16223.1 Cannabis sativa PK16223.1 N
PRUPE_ppa022385mg Prunus persica PRUPE_ppa022385mg N
SapurV1A.0083s0430 Salix purpurea SapurV1A.0083s0430 N
Sb03g002050 Sorghum bicolor Sb03g002050 N
Sb03g034950 Sorghum bicolor Sb03g034950 N
Sb04g008840 Sorghum bicolor Sb04g008840 N
Si002311m.g Setaria italica Si002311m.g N
Si018161m.g Setaria italica Si018161m.g N
Solyc07g062710.2 Solanum lycopersicum Solyc07g062710.2 N
TCM_031686 Theobroma cacao TCM_031686 N
TRAES3BF093300030CFD_g Triticum aestivum TRAES3BF093300030CFD_g N
TRAES3BF117100130CFD_g Triticum aestivum TRAES3BF117100130CFD_g N
Traes_2BS_C9A338257 Triticum aestivum Traes_2BS_C9A338257 N
Traes_5BL_573ABF1D7 Triticum aestivum Traes_5BL_573ABF1D7 N
Traes_5DL_D30ADBFDE Triticum aestivum Traes_5DL_D30ADBFDE N
VIT_19s0014g01780 Vitis vinifera VIT_19s0014g01780 N