Irf3 (Rattus norvegicus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSRNOG00000043388 T244371_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irf3
M00174_2.00 		Mus musculus
RDWNBGMAAS
STTKCVNWHY		 PBM
Badis et al.(2009)
Irf3_3985 		0.933 0.933
Irf3
M09241_2.00 		Mus musculus
RRRARDGAAAVDGRAASNRA
TYNSTTYCHBTTTCHYTYYY		 Misc
Kulakovskiy et al.(2013)
IRF3_MOUSE.H11MO.0.A 		0.933 0.933
IRF3
M03331_2.00 		Homo sapiens
NNRRAANGGAAACCGAAACYR
YRGTTTCGGTTTCCNTTYYNN		 SELEX
Jolma et al.(2013)
IRF3_1 		0.856 0.856
IRF3
M05531_2.00 		Homo sapiens
DCVGTTTCSNSGAAACCGMAASN
NSTTKCGGTTTCSNSGAAACBGH		 SELEX
Yin et al.(2017)
IRF3_eDBD_HT-SELEX 		0.856 0.856
IRF3
M05533_2.00 		Homo sapiens
HSGAAAVBGAAACYGAAACN
NGTTTCRGTTTCVBTTTCSD		 SELEX
Yin et al.(2017)
IRF3_FL_HT-SELEX 		0.856 0.856
IRF3
M09234_2.00 		Homo sapiens
RRRARDGAAAVDGRAASNRA
TYNSTTYCHBTTTCHYTYYY		 Misc
Kulakovskiy et al.(2013)
IRF3_HUMAN.H11MO.0.B 		0.856 0.856
IRF3
M10883_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF3_Q3 		0.856 0.856
IRF3
M05532_2.00 		Homo sapiens
KCDSTTTCCHGGAAAMNRAWAV
BTWTYNKTTTCCDGGAAASHGM		 SELEX
Yin et al.(2017)
IRF3_eDBD_Methyl-HT-SELEX 		0.856 0.856
IRF3
M05534_2.00 		Homo sapiens
HGGAAABBGAAASBGAAASN
NSTTTCVSTTTCVVTTTCCD		 SELEX
Yin et al.(2017)
IRF3_FL_Methyl-HT-SELEX 		0.856 0.856
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000027786 IRF 7 110

Links

Other IRF family TFs
Other Rattus norvegicus TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R000713 Calypte anna Aan_R000713 I
Afo_R009816 Aptenodytes forsteri Afo_R009816 I
ENSAMEG00000004487 Ailuropoda melanoleuca ENSAMEG00000004487 I
ENSAPLG00000014705 Anas platyrhynchos ENSAPLG00000014705 I
STAT6 Bos taurus ENSBTAG00000006335 I
STAT6 Canis familiaris ENSCAFG00000000163 I
STAT6 Callithrix jacchus ENSCJAG00000010327 I
ENSCSAG00000004973 Chlorocebus sabaeus ENSCSAG00000004973 I
STAT6 Dasypus novemcinctus ENSDNOG00000033099 I
STAT6 Equus caballus ENSECAG00000008705 I
ENSFALG00000000376 Ficedula albicollis ENSFALG00000000376 I
STAT6 Felis catus ENSFCAG00000014571 I
STAT6 Homo sapiens ENSG00000166888 D
STAT6 Loxodonta africana ENSLAFG00000005970 I
ENSMEUG00000016670 Macropus eugenii ENSMEUG00000016670 I
STAT6 Microcebus murinus ENSMICG00000009087 I
STAT6 Myotis lucifugus ENSMLUG00000006689 I
STAT6 Monodelphis domestica ENSMODG00000019411 I
ENSMPUG00000001746 Mustela putorius furo ENSMPUG00000001746 I
Stat6 Mus musculus ENSMUSG00000002147 D
ENSNLEG00000017396 Nomascus leucogenys ENSNLEG00000017396 I
STAT6 Oryctolagus cuniculus ENSOCUG00000007929 I
STAT6 Otolemur garnettii ENSOGAG00000005002 I
STAT6 Ochotona princeps ENSOPRG00000013409 I
STAT6 Procavia capensis ENSPCAG00000009432 I
ENSPPYG00000004680 Pongo abelii ENSPPYG00000004680 I
Stat6 Rattus norvegicus ENSRNOG00000025023 I
ENSSHAG00000006372 Sarcophilus harrisii ENSSHAG00000006372 I
ENSSSCG00000025960 Sus scrofa ENSSSCG00000025960 I
ENSSSCG00000026524 Sus scrofa ENSSSCG00000026524 I
ENSSTOG00000013280 Ictidomys tridecemlineatus ENSSTOG00000013280 I
STAT6 Tupaia belangeri ENSTBEG00000013664 I
ENSTGUG00000015716 Taeniopygia guttata ENSTGUG00000015716 I
STAT6 Tursiops truncatus ENSTTRG00000013064 I
Gfo_R015302 Geospiza fortis Gfo_R015302 I
Myotis_brandtii_STAT6_10018366 Myotis brandtii Myotis_brandtii_STAT6_10018366 I