irf4a (Takifugu rubripes)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSTRUG00000011568 T244436_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		0.886 0.886
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		0.886 0.886
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		0.886 0.886
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		0.886 0.886
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		0.886 0.886
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		0.886 0.886
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		0.886 0.886
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		0.886 0.886
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		0.886 0.886
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		0.886 0.886
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		0.886 0.886
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.876 0.876
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.876 0.876
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.810 0.810
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.810 0.810
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.810 0.810
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.810 0.810
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.810 0.810
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.810 0.810
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.810 0.810
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.810 0.810
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.810 0.810
Irf8
M09246_2.00 		Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A 		0.800 0.800
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000029229 IRF 22 127
ENSTRUP00000029230 IRF 19 124
ENSTRUP00000029231 IRF 19 124
ENSTRUP00000029232 IRF 17 122
ENSTRUP00000029233 IRF 9 114
ENSTRUP00000029234 IRF 9 114

Links

Other IRF family TFs
Other Takifugu rubripes TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R002665 Calypte anna Aan_R002665 I 0.000
Afo_R008170 Aptenodytes forsteri Afo_R008170 I 0.000
Alligator_sinensis_CCG010563.1 Alligator sinensis Alligator_sinensis_CCG010563.1 I 0.000
Brh_R011085 Buceros rhinoceros Brh_R011085 I 0.000
Cmyd_10016816 Chelonia mydas Cmyd_10016816 I 0.000
ZBTB37 Anolis carolinensis ENSACAG00000015410 I 0.000
ENSAMEG00000015639 Ailuropoda melanoleuca ENSAMEG00000015639 I 0.000
ENSAMXG00000018035 Astyanax mexicanus ENSAMXG00000018035 I 0.000
ENSAPLG00000004883 Anas platyrhynchos ENSAPLG00000004883 I 0.000
ZBTB37 Bos taurus ENSBTAG00000004361 I 0.000
ENSBTAP00000038286-D1 Bos grunniens ENSBTAP00000038286-D1 I 0.000
ZBTB37 Canis familiaris ENSCAFG00000014502 I 0.000
ZBTB37 Choloepus hoffmanni ENSCHOG00000007975 I 0.000
ZBTB37 Callithrix jacchus ENSCJAG00000009215 I 0.000
ZBTB37 Cavia porcellus ENSCPOG00000004346 I 0.000
ENSCSAG00000011813 Chlorocebus sabaeus ENSCSAG00000011813 I 0.000
zbtb37 Danio rerio ENSDARG00000042689 I 0.000
ZBTB37 Dasypus novemcinctus ENSDNOG00000007085 I 0.000
Zbtb37 Dipodomys ordii ENSDORG00000008483 I 0.000
ZBTB37 Equus caballus ENSECAG00000013585 I 0.000
ZBTB37 Erinaceus europaeus ENSEEUG00000007899 I 0.000
ZBTB37 Echinops telfairi ENSETEG00000019314 I 0.000
ENSFALG00000002979 Ficedula albicollis ENSFALG00000002979 I 0.000
ZBTB37 Felis catus ENSFCAG00000026634 I 0.000
ZBTB37 Homo sapiens ENSG00000185278 D 0.000
zbtb37 Gasterosteus aculeatus ENSGACG00000013541 I 0.000
ZBTB37 Gallus gallus ENSGALG00000004597 I 0.000
ZBTB37 Gorilla gorilla ENSGGOG00000000324 I 0.000
ENSGMOG00000013329 Gadus morhua ENSGMOG00000013329 I 0.000
ENSLACG00000016612 Latimeria chalumnae ENSLACG00000016612 I 0.000
ZBTB37 Loxodonta africana ENSLAFG00000004363 I 0.000
ENSLOCG00000000232 Lepisosteus oculatus ENSLOCG00000000232 I 0.000
ENSMEUG00000007312 Macropus eugenii ENSMEUG00000007312 I 0.000
ZBTB37 Meleagris gallopavo ENSMGAG00000001976 I 0.000
ZBTB37 Microcebus murinus ENSMICG00000002978 I 0.000
ZBTB37 Myotis lucifugus ENSMLUG00000011082 I 0.000
ZBTB37 Macaca mulatta ENSMMUG00000022801 I 0.000
ZBTB37 Monodelphis domestica ENSMODG00000004228 I 0.000
ENSMPUG00000004728 Mustela putorius furo ENSMPUG00000004728 I 0.000
Zbtb37 Mus musculus ENSMUSG00000043467 I 0.000
ENSNLEG00000015319 Nomascus leucogenys ENSNLEG00000015319 I 0.000
ZBTB37 Ornithorhynchus anatinus ENSOANG00000000922 I 0.000
ZBTB37 Oryctolagus cuniculus ENSOCUG00000017475 I 0.000
ZBTB37 Otolemur garnettii ENSOGAG00000027115 I 0.000
ENSONIG00000007779 Oreochromis niloticus ENSONIG00000007779 I 0.000
ZBTB37 Ochotona princeps ENSOPRG00000013039 I 0.000
zbtb37 Oryzias latipes ENSORLG00000014087 I 0.000
ENSP00000415293 Macaca fascicularis ENSP00000415293 I 0.000
ENSPANG00000002385 Papio anubis ENSPANG00000002385 I 0.000
ENSPFOG00000005554 Poecilia formosa ENSPFOG00000005554 I 0.000
ENSPPYG00000000492 Pongo abelii ENSPPYG00000000492 I 0.000
ENSPSIG00000016668 Pelodiscus sinensis ENSPSIG00000016668 I 0.000
ZBTB37 Pan troglodytes ENSPTRG00000001700 I 0.000
ZBTB37 Pteropus vampyrus ENSPVAG00000007588 I 0.000
Zbtb37 Rattus norvegicus ENSRNOG00000026907 I 0.000
ENSSHAG00000006755 Sarcophilus harrisii ENSSHAG00000006755 I 0.000
ZBTB37 Sus scrofa ENSSSCG00000015494 I 0.000
ENSSTOG00000022488 Ictidomys tridecemlineatus ENSSTOG00000022488 I 0.000
ZBTB37 Tupaia belangeri ENSTBEG00000004052 I 0.000
ZBTB37 Taeniopygia guttata ENSTGUG00000018373 I 0.000
zbtb37 Tetraodon nigroviridis ENSTNIG00000000126 I 0.000
zbtb37 Takifugu rubripes ENSTRUG00000010776 I 0.000
ENSTSYG00000009926 Tarsius syrichta ENSTSYG00000009926 I 0.000
ZBTB37 Tursiops truncatus ENSTTRG00000008564 I 0.000
ZBTB37 Vicugna pacos ENSVPAG00000002589 I 0.000
ENSXMAG00000005565 Xiphophorus maculatus ENSXMAG00000005565 I 0.000
Gfo_R006654 Geospiza fortis Gfo_R006654 I 0.000
Myotis_brandtii_ZBTB37_10032059 Myotis brandtii Myotis_brandtii_ZBTB37_10032059 I 0.000
Ogr05757 Ophisaurus gracilis Ogr05757 I 0.000
Pvit_13430 Pogona vitticeps Pvit_13430 I 0.000
zbtb37 Xenopus tropicalis XB-GENE-979959 I 0.000