Brh_R000433 (Buceros rhinoceros)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00605 (IRF) IPR001346 Brh_R000433 T244517_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		0.981 0.981
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		0.981 0.981
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		0.981 0.981
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		0.981 0.981
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		0.981 0.981
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		0.981 0.981
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		0.981 0.981
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		0.981 0.981
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		0.981 0.981
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		0.981 0.981
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		0.981 0.981
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.971 0.971
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.971 0.971
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.810 0.810
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.810 0.810
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.810 0.810
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.810 0.810
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.810 0.810
Irf8
M09246_2.00 		Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A 		0.810 0.810
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.810 0.810
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.810 0.810
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.810 0.810
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.810 0.810
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Brh_R000433 IRF 19 124

Links

Other IRF family TFs
Other Buceros rhinoceros TFs

157 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_023510 Acremonium chrysogenum ACRE_023510 N
AUEXF2481DRAFT_34307 Aureobasidium subglaciale AUEXF2481DRAFT_34307 N
BAUCODRAFT_69220 Baudoinia compniacensis BAUCODRAFT_69220 N
BBA_06148 Beauveria bassiana BBA_06148 N
Bcin09g00170 Botrytis cinerea Bcin09g00170 N
ACLA_045730 Aspergillus clavatus CADACLAG00004722 N
CADAFLAG00005085 Aspergillus flavus CADAFLAG00005085 N
ANIA_10548 Aspergillus nidulans CADANIAG00006108 N
CFIO01_11865 Colletotrichum fioriniae CFIO01_11865 N
CH063_11448 Colletotrichum higginsianum CH063_11448 N
CHGG_07031 Chaetomium globosum CHGG_07031 N
Cob_09598 Colletotrichum orbiculare Cob_09598 N
COCC4DRAFT_201237 Bipolaris maydis COCC4DRAFT_201237 N
COCCADRAFT_30369 Bipolaris zeicola COCCADRAFT_30369 N
COCMIDRAFT_100081 Bipolaris oryzae COCMIDRAFT_100081 N
COCSADRAFT_193461 Bipolaris sorokiniana COCSADRAFT_193461 N
COCVIDRAFT_107172 Bipolaris victoriae COCVIDRAFT_107172 N
DOTSEDRAFT_72262 Dothistroma septosporum DOTSEDRAFT_72262 N
DRE_06414 Drechslerella stenobrocha DRE_06414 N
e_gw1.5.1073.1 Nectria haematococca e_gw1.5.1073.1 N
e_gw1.7.43.1 Cryphonectria parasitica e_gw1.7.43.1 N
FFUJ_07420 Fusarium fujikuroi FFUJ_07420 N
GGTG_00276 Gaeumannomyces graminis GGTG_00276 N
gw1.1.946.1 Neurospora discreta gw1.1.946.1 N
H072_3652 Dactylellina haptotyla H072_3652 N
LEMA_P045160.1 Leptosphaeria maculans LEMA_P045160.1 N
M437DRAFT_55629 Aureobasidium melanogenum M437DRAFT_55629 N
M438DRAFT_284105 Aureobasidium pullulans M438DRAFT_284105 N
MAC_00769 Metarhizium acridum MAC_00769 N
MAJ_06853 Metarhizium majus MAJ_06853 N
MAPG_11028 Magnaporthe poae MAPG_11028 N
MGG_15085 Magnaporthe oryzae MGG_15085 N
NCU04295 Neurospora crassa NCU04295 N
NechaG41859 Fusarium solani NechaG41859 N
OIDMADRAFT_190476 Oidiodendron maius OIDMADRAFT_190476 N
Pc22g17270 Penicillium chrysogenum Pc22g17270 N
PCH_Pc22g17270 Penicillium rubens PCH_Pc22g17270 N
PDE_06088 Penicillium oxalicum PDE_06088 N
PEX1_010730 Penicillium expansum PEX1_010730 N
PFICI_13123 Pestalotiopsis fici PFICI_13123 N
PITC_070290 Penicillium italicum PITC_070290 N
PTT_18362 Pyrenophora teres PTT_18362 N
PV09_03879 Verruconis gallopava PV09_03879 N
S40288_02744 Stachybotrys chartarum S40288_02744 N
SEPMUDRAFT_152064 Sphaerulina musiva SEPMUDRAFT_152064 N
SETTUDRAFT_134587 Setosphaeria turcica SETTUDRAFT_134587 N
THITE_2108982 Thielavia terrestris THITE_2108982 N
TRIATDRAFT_243762 Trichoderma atroviride TRIATDRAFT_243762 N
TSTA_071060 Talaromyces stipitatus TSTA_071060 N
U727_0043424091 Penicillium solitum U727_0043424091 N
UCRNP2_5763 Neofusicoccum parvum UCRNP2_5763 N
VDAG_00066 Verticillium dahliae VDAG_00066 N
VDBG_00456 Verticillium alfalfae VDBG_00456 N
VDBG_00456 Verticillium albo atrum VDBG_00456 N
VHEMI08735 Torrubiella hemipterigena VHEMI08735 N
X797_008350 Metarhizium robertsii X797_008350 N