CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Myotis_brandtii_IRF3_10017659
(
Myotis brandtii
)
IRF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00605 (IRF)
IPR001346
Myotis_brandtii_IRF3_10017659
T244556_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
IRF3
M03331_2.00
Homo sapiens
NNRRAANGGAAACCGAAACYR
YRGTTTCGGTTTCCNTTYYNN
SELEX
Jolma et al.(2013)
IRF3_1
0.913
0.913
IRF3
M05531_2.00
Homo sapiens
DCVGTTTCSNSGAAACCGMAASN
NSTTKCGGTTTCSNSGAAACBGH
SELEX
Yin et al.(2017)
IRF3_eDBD_HT-SELEX
0.913
0.913
IRF3
M05533_2.00
Homo sapiens
HSGAAAVBGAAACYGAAACN
NGTTTCRGTTTCVBTTTCSD
SELEX
Yin et al.(2017)
IRF3_FL_HT-SELEX
0.913
0.913
IRF3
M09234_2.00
Homo sapiens
RRRARDGAAAVDGRAASNRA
TYNSTTYCHBTTTCHYTYYY
Misc
Kulakovskiy et al.(2013)
IRF3_HUMAN.H11MO.0.B
0.913
0.913
IRF3
M10883_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IRF3_Q3
0.913
0.913
IRF3
M05532_2.00
Homo sapiens
KCDSTTTCCHGGAAAMNRAWAV
BTWTYNKTTTCCDGGAAASHGM
SELEX
Yin et al.(2017)
IRF3_eDBD_Methyl-HT-SELEX
0.913
0.913
IRF3
M05534_2.00
Homo sapiens
HGGAAABBGAAASBGAAASN
NSTTTCVSTTTCVVTTTCCD
SELEX
Yin et al.(2017)
IRF3_FL_Methyl-HT-SELEX
0.913
0.913
Irf3
M00174_2.00
Mus musculus
RDWNBGMAAS
STTKCVNWHY
PBM
Badis et al.(2009)
Irf3_3985
0.875
0.875
Irf3
M09241_2.00
Mus musculus
RRRARDGAAAVDGRAASNRA
TYNSTTYCHBTTTCHYTYYY
Misc
Kulakovskiy et al.(2013)
IRF3_MOUSE.H11MO.0.A
0.875
0.875
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Myotis_brandtii_IRF3_10017659
IRF
21
124
RILPWLVSQLDEGQLEGVAWLDQSRRRFRIPWKHGLRQDAQQEDFGIFQAWAEASGAYTPGRDRPDLPTWKRNFRSALNRKEVLRLAEDRSKDPHDPHKIYEFV
Links
Other
IRF
family TFs
Other
Myotis brandtii
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000013000
Ailuropoda melanoleuca
ENSAMEG00000013000
I
ENSCAFG00000023232
Canis familiaris
ENSCAFG00000023232
I
ENSCJAG00000032790
Callithrix jacchus
ENSCJAG00000032790
I
ENSCPOG00000026099
Cavia porcellus
ENSCPOG00000026099
I
ENSDNOG00000031015
Dasypus novemcinctus
ENSDNOG00000031015
I
ENSDNOG00000048270
Dasypus novemcinctus
ENSDNOG00000048270
I
ENSFCAG00000024677
Felis catus
ENSFCAG00000024677
I
ENSGGOG00000027412
Gorilla gorilla
ENSGGOG00000027412
I
ENSLAFG00000026006
Loxodonta africana
ENSLAFG00000026006
I
ENSLAFG00000029465
Loxodonta africana
ENSLAFG00000029465
I
ENSMPUG00000003600
Mustela putorius furo
ENSMPUG00000003600
I
Cphx3
Mus musculus
ENSMUSG00000094817
I
Cphx1
Mus musculus
ENSMUSG00000095975
D
Cphx2
Mus musculus
ENSMUSG00000098463
I
ENSNLEG00000013097
Nomascus leucogenys
ENSNLEG00000013097
I
Cphx
Rattus norvegicus
ENSRNOG00000025433
I