Ogr08841 (Ophisaurus gracilis)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00605 (IRF) IPR001346 Ogr08841 T244568_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irf8
M09246_2.00 		Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A 		0.951 0.951
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.931 0.931
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.931 0.931
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.931 0.931
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.931 0.931
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.931 0.931
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.931 0.931
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.931 0.931
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.931 0.931
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.931 0.931
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.775 0.775
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		0.775 0.775
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		0.775 0.775
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		0.775 0.775
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		0.775 0.775
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.775 0.775
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		0.775 0.775
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		0.775 0.775
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		0.775 0.775
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		0.775 0.775
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		0.775 0.775
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		0.775 0.775
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		0.775 0.775
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr08841 IRF 299 401

Links

Other IRF family TFs
Other Ophisaurus gracilis TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R006196 Calypte anna Aan_R006196 I 0.000
Afo_R011287 Aptenodytes forsteri Afo_R011287 I 0.000
Alligator_sinensis_CCG021133.1 Alligator sinensis Alligator_sinensis_CCG021133.1 I 0.000
Brh_R003680 Buceros rhinoceros Brh_R003680 I 0.000
Cmyd_10007079 Chelonia mydas Cmyd_10007079 I 0.000
STAT3 Anolis carolinensis ENSACAG00000017940 I 0.000
ENSAMEG00000006266 Ailuropoda melanoleuca ENSAMEG00000006266 I 0.000
ENSAMXG00000000502 Astyanax mexicanus ENSAMXG00000000502 I 0.000
ENSAPLG00000007739 Anas platyrhynchos ENSAPLG00000007739 I 0.000
STAT3 Bos taurus ENSBTAG00000021523 I 0.000
ENSBTAP00000028687-D1 Bos grunniens ENSBTAP00000028687-D1 I 0.000
STAT3 Canis familiaris ENSCAFG00000015213 I 0.000
STAT3 Callithrix jacchus ENSCJAG00000000409 I 0.000
STAT3 Cavia porcellus ENSCPOG00000007939 I 0.000
ENSCSAG00000003215 Chlorocebus sabaeus ENSCSAG00000003215 I 0.000
stat3 Danio rerio ENSDARG00000022712 I 0.000
STAT3 Dasypus novemcinctus ENSDNOG00000001471 I 0.000
STAT3 Equus caballus ENSECAG00000016439 I 0.000
ENSFALG00000000674 Ficedula albicollis ENSFALG00000000674 I 0.000
STAT3 Felis catus ENSFCAG00000002154 I 0.000
STAT3 Homo sapiens ENSG00000168610 D 0.000
stat3 Gasterosteus aculeatus ENSGACG00000008607 I 0.000
STAT3 Gallus gallus ENSGALG00000003267 I 0.000
STAT3 Gorilla gorilla ENSGGOG00000017110 I 0.000
ENSGMOG00000014955 Gadus morhua ENSGMOG00000014955 I 0.000
ENSLACG00000012019 Latimeria chalumnae ENSLACG00000012019 I 0.000
STAT3 Loxodonta africana ENSLAFG00000014062 I 0.000
ENSLOCG00000012514 Lepisosteus oculatus ENSLOCG00000012514 I 0.000
ENSMEUG00000006663 Macropus eugenii ENSMEUG00000006663 I 0.000
STAT3 Meleagris gallopavo ENSMGAG00000003545 I 0.000
STAT3 Microcebus murinus ENSMICG00000012015 I 0.000
STAT3 Myotis lucifugus ENSMLUG00000017449 I 0.000
STAT3 Macaca mulatta ENSMMUG00000010707 I 0.000
ENSMMUP00000014032 Macaca fascicularis ENSMMUP00000014032 I 0.000
STAT3 Monodelphis domestica ENSMODG00000028212 I 0.000
ENSMPUG00000010509 Mustela putorius furo ENSMPUG00000010509 I 0.000
Stat3 Mus musculus ENSMUSG00000004040 D 0.000
ENSNLEG00000011454 Nomascus leucogenys ENSNLEG00000011454 I 0.000
ENSOARG00000001511 Ovis aries ENSOARG00000001511 I 0.000
STAT3 Oryctolagus cuniculus ENSOCUG00000011034 I 0.000
STAT3 Otolemur garnettii ENSOGAG00000001517 I 0.000
ENSONIG00000001148 Oreochromis niloticus ENSONIG00000001148 I 0.000
stat3 Oryzias latipes ENSORLG00000004061 I 0.000
ENSPANG00000021451 Papio anubis ENSPANG00000021451 I 0.000
ENSPFOG00000012687 Poecilia formosa ENSPFOG00000012687 I 0.000
ENSPFOG00000012990 Poecilia formosa ENSPFOG00000012990 I 0.000
ENSPMAG00000002770 Petromyzon marinus ENSPMAG00000002770 I 0.000
ENSPPYG00000008392 Pongo abelii ENSPPYG00000008392 I 0.000
STAT3 Pan troglodytes ENSPTRG00000009200 I 0.000
Stat3 Rattus norvegicus ENSRNOG00000019742 I 0.000
STAT3 Sorex araneus ENSSARG00000014231 I 0.000
ENSSHAG00000014833 Sarcophilus harrisii ENSSHAG00000014833 I 0.000
STAT3 Sus scrofa ENSSSCG00000017403 I 0.000
ENSSTOG00000006741 Ictidomys tridecemlineatus ENSSTOG00000006741 I 0.000
STAT3 Taeniopygia guttata ENSTGUG00000002600 I 0.000
stat3 Takifugu rubripes ENSTRUG00000015348 I 0.000
STAT3 Tursiops truncatus ENSTTRG00000007163 I 0.000
ENSXMAG00000008972 Xiphophorus maculatus ENSXMAG00000008972 I 0.000
Gfo_R009044 Geospiza fortis Gfo_R009044 I 0.000
Myotis_brandtii_STAT3_10015327 Myotis brandtii Myotis_brandtii_STAT3_10015327 I 0.000
Pvit_13933 Pogona vitticeps Pvit_13933 I 0.000
stat3.2 Xenopus tropicalis XB-GENE-1020976 I 0.000
stat3.2.L Xenopus laevis XB-GENE-1020979 I 0.000
stat3.1 Xenopus tropicalis XB-GENE-481047 I 0.000
stat3.1.L Xenopus laevis XB-GENE-865436 I 0.000