irf2.S (Xenopus laevis)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00605 (IRF) IPR001346 XB-GENE-17339545 T244620_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irf2
M00805_2.00 		Mus musculus
NDWNHGAAAV
BTTTCDNWHN		 PBM
Weirauch et al.(2013)
pTH2835 		0.924 0.924
IRF2
M05545_2.00 		Homo sapiens
NGAAAVYGAAAS
STTTCRBTTTCN		 SELEX
Yin et al.(2017)
IRF2_FL_HT-SELEX 		0.924 0.924
IRF2
M02691_2.00 		Homo sapiens
SGAAAGYGAAASYNWWHH
DDWWNRSTTTCRCTTTCS		 SELEX
Mathelier et al.(2014)
MA0051.1 		0.924 0.924
IRF2
M09237_2.00 		Homo sapiens
NRAANNGAAASYGAAASYRV
BYRSTTTCRSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF2_HUMAN.H11MO.0.A 		0.924 0.924
Irf2
M09245_2.00 		Mus musculus
NRAANNGAAASYGAAASYRV
BYRSTTTCRSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF2_MOUSE.H11MO.0.B 		0.924 0.924
IRF2
M09596_2.00 		Homo sapiens
NRAAVNRRAASB
VSTTYYNBTTYN		 Misc
Heinz et al.(2010)
Erythroblas-IRF2_GSE36985 		0.924 0.924
IRF2
M10892_2.00 		Homo sapiens
GAAAAGYGAAASY
RSTTTCRCTTTTC		 Transfac
Matys et al.(2006)
V$IRF2_01 		0.924 0.924
IRF2
M10893_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF2_Q6 		0.924 0.924
IRF2
M05546_2.00 		Homo sapiens
NGAAASYGAAAS
STTTCRSTTTCN		 SELEX
Yin et al.(2017)
IRF2_FL_Methyl-HT-SELEX 		0.924 0.924
IRF1
M08142_2.00 		Homo sapiens
RWANNGAAASYGAAASYRNNN
NNNYRSTTTCRSTTTCNNTWY		 ChIP-seq
Mathelier et al.(2014)
MA0050.2 		0.752 0.752
IRF1
M09233_2.00 		Homo sapiens
NRAANNGAAASWGAAASHRN
NYDSTTTCWSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF1_HUMAN.H11MO.0.A 		0.752 0.752
Irf1
M09242_2.00 		Mus musculus
VRAANNGAAASYGAAASYVN
NBRSTTTCRSTTTCNNTTYB		 Misc
Kulakovskiy et al.(2013)
IRF1_MOUSE.H11MO.0.A 		0.752 0.752
IRF1
M09594_2.00 		Homo sapiens
GAAASTGAAASY
RSTTTCASTTTC		 Misc
Heinz et al.(2010)
PBMC-IRF1_GSE43036 		0.752 0.752
IRF1
M10879_2.00 		Homo sapiens
SAAAASYGAAASY
RSTTTCRSTTTTS		 Transfac
Matys et al.(2006)
V$IRF1_01 		0.752 0.752
IRF1
M10880_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_03 		0.752 0.752
IRF1
M10881_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_Q5 		0.752 0.752
IRF1
M10882_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_Q6 		0.752 0.752
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH77187 IRF 7 112

Links

Other IRF family TFs
Other Xenopus laevis TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000006213 Ailuropoda melanoleuca ENSAMEG00000006213 I
ZKSCAN5 Canis familiaris ENSCAFG00000023158 I
ZKSCAN5 Callithrix jacchus ENSCJAG00000015788 I
ENSCSAG00000017802 Chlorocebus sabaeus ENSCSAG00000017802 I
ZKSCAN5 Equus caballus ENSECAG00000012353 I
ZKSCAN5 Homo sapiens ENSG00000196652 D
ZKSCAN5 Gorilla gorilla ENSGGOG00000009555 I
ZKSCAN5 Macaca mulatta ENSMMUG00000020141 I
Zkscan5 Mus musculus ENSMUSG00000055991 D
ENSNLEG00000011141 Nomascus leucogenys ENSNLEG00000011141 I
ZKSCAN5 Oryctolagus cuniculus ENSOCUG00000002447 I
ZKSCAN5 Otolemur garnettii ENSOGAG00000010899 I
ENSP00000322872 Macaca fascicularis ENSP00000322872 I
ENSP00000377725-D1 Bos grunniens ENSP00000377725-D1 I
ENSPANG00000000548 Papio anubis ENSPANG00000000548 I
ENSPPYG00000017382 Pongo abelii ENSPPYG00000017382 I
ZKSCAN5 Pan troglodytes ENSPTRG00000019455 I
ZKSCAN5 Pteropus vampyrus ENSPVAG00000009665 I
ENSSSCG00000022023 Sus scrofa ENSSSCG00000022023 I
ENSSTOG00000019879 Ictidomys tridecemlineatus ENSSTOG00000019879 I
ENSTSYG00000014107 Tarsius syrichta ENSTSYG00000014107 I
ZKSCAN5 Tursiops truncatus ENSTTRG00000016188 I