CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LBD1
(
Arabidopsis thaliana
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
AT1G07900
T244865_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G07900.1
LOB
33
131
PCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQV
AT1G07900.1
LOB
127
166
AKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQDNMSFESN
Links
Other
LOB
family TFs
Other
Arabidopsis thaliana
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGGC5_6429
Colletotrichum gloeosporioides
CGGC5_6429
N
CH063_12828
Colletotrichum higginsianum
CH063_12828
N
EV44_g1725
Erysiphe necator
EV44_g1725
N
GLRG_04435
Colletotrichum graminicola
GLRG_04435
N
GSTUM_00004693001
Tuber melanosporum
GSTUM_00004693001
N
HMPREF1120_05468
Exophiala dermatitidis
HMPREF1120_05468
N
HMPREF1624_06130
Sporothrix schenckii
HMPREF1624_06130
N
MPH_04816
Macrophomina phaseolina
MPH_04816
N
PV06_00042
Exophiala oligosperma
PV06_00042
N
PV08_04487
Exophiala spinifera
PV08_04487
N
VDAG_08764
Verticillium dahliae
VDAG_08764
N