CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LBD5
(
Arabidopsis thaliana
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
AT1G36000
T244868_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G36000.1
LOB
9
107
PCSVCITKNRNCPRFCEYAEYFPYELQSQYESANELFGTPNIITMMQHAPEEKKQMLATSIIMEGNAWTEDPISGGFGMIQKLMWKIMLHKAYLRELQE
Links
Other
LOB
family TFs
Other
Arabidopsis thaliana
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Al_scaffold_0008_1406
Arabidopsis lyrata
Al_scaffold_0008_1406
N
0.826
LBD8
Arabidopsis thaliana
AT2G19510
N
0.869
Bostr.18351s0410
Boechera stricta
Bostr.18351s0410
N
0.717
Carubv10015980m.g
Capsella rubella
Carubv10015980m.g
N
0.727