CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LBD22
(
Arabidopsis thaliana
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
AT3G13850
T244888_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT3G13850.1
LOB
36
134
ACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKSLTPPEKDAAMHTIMFQSDARANDPVDGCYGIIKKLQYQIEYTRNELEIVLQ
Links
Other
LOB
family TFs
Other
Arabidopsis thaliana
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB00088.1
Alternaria brassicicola
AB00088.1
N
ACRE_028580
Acremonium chrysogenum
ACRE_028580
N
CH063_03657
Colletotrichum higginsianum
CH063_03657
N
COCC4DRAFT_87358
Bipolaris maydis
COCC4DRAFT_87358
N
COCCADRAFT_90976
Bipolaris zeicola
COCCADRAFT_90976
N
COCMIDRAFT_81530
Bipolaris oryzae
COCMIDRAFT_81530
N
COCVIDRAFT_32721
Bipolaris victoriae
COCVIDRAFT_32721
N
DOTSEDRAFT_176530
Dothistroma septosporum
DOTSEDRAFT_176530
N
F503_03119
Ophiostoma piceae uamh
F503_03119
N
FFUJ_01581
Fusarium fujikuroi
FFUJ_01581
N
fgenesh1_pg.sca_8_chr1_1_0000412
Nectria haematococca
fgenesh1_pg.sca_8_chr1_1_0000412
N
FGRRES_01378
Fusarium graminearum
FGRRES_01378
N
FPSE_11552
Fusarium pseudograminearum
FPSE_11552
N
gw1.2.32.1
Cochliobolus heterostrophus C5
gw1.2.32.1
N
HMPREF1624_07083
Sporothrix schenckii
HMPREF1624_07083
N
col-25
Neurospora crassa
NCU06068
N
NechaG74381
Fusarium solani
NechaG74381
N
PFICI_13726
Pestalotiopsis fici
PFICI_13726
N
PTRG_10286
Pyrenophora triticirepentis
PTRG_10286
N
PTT_13765
Pyrenophora teres
PTT_13765
N
PV09_00164
Verruconis gallopava
PV09_00164
N
SETTUDRAFT_87447
Setosphaeria turcica
SETTUDRAFT_87447
N
SMAC_07447
Sordaria macrospora
SMAC_07447
N
SNOG_09876
Stagonospora nodorum
SNOG_09876
N
SPBR_06366
Sporothrix brasiliensis
SPBR_06366
N
VDAG_01189
Verticillium dahliae
VDAG_01189
N
VDBG_03963
Verticillium alfalfae
VDBG_03963
N
VDBG_03963
Verticillium albo atrum
VDBG_03963
N