LBD23 (Arabidopsis thaliana)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 AT3G26620 T244890_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD23
M06964_2.00		 Arabidopsis thaliana
NGCGNDRAWNNCGCN
NGCGNNWTYHNCGCN		 Dap-seq
OMalley et al.(2016)
LBD23_col_a		 (Direct) (Direct)
LBD23
M06965_2.00		 Arabidopsis thaliana
DGCGDDRRWNNCGCN
NGCGNNWYYHHCGCH		 Dap-seq
OMalley et al.(2016)
LBD23_colamp_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G26620.1 LOB 5 103

Links

Other LOB family TFs
Other Arabidopsis thaliana TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOC_0000088801 Angiostrongylus costaricensis ACOC_0000088801 N 0.000
ANCCAN_05988 Ancylostoma caninum ANCCAN_05988 N 0.000
CGOC_0000108301 Cylicostephanus goldi CGOC_0000108301 N 0.000
CJA36291 Caenorhabditis japonica CJA36291 N 0.000
CRE10858 Caenorhabditis remanei CRE10858 N 0.000
Hba_00666 Heterorhabditis bacteriophora Hba_00666 N 0.000
HPBE_0001056201 Heligmosomoides bakeri HPBE_0001056201 N 0.000
L889_g3780 Steinernema feltiae L889_g3780 N 0.000
NECAME_16810 Necator americanus NECAME_16810 N 0.000
TCNE_0001343401 Toxocara canis TCNE_0001343401 N 0.000