Bo3g024350 (Brassica oleracea)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 Bo3g024350 T244966_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD4
M02261_2.00 		Arabidopsis thaliana
VDNVCGSNNN
NNNSCGBNHB		 PBM
Weirauch et al.(2014)
pTH7515 		0.758 0.758
gw1.238.28.1
M02262_2.00 		Physcomitrella patens
NNNNNVNGSN
NSCNBNNNNN		 PBM
Weirauch et al.(2014)
pTH8459 		0.758 0.758
LOB
M06966_2.00 		Arabidopsis thaliana
NVCGGCGGHRRHDRMGGMGGH
DCCKCCKYHDYYDCCGCCGBN		 Dap-seq
OMalley et al.(2016)
LOB_col_a 		0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g024350.1 LOB 8 106

Links

Other LOB family TFs
Other Brassica oleracea TFs

307 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HR96 Aedes aegypti AAEL007202 I
AALB008395 Anopheles albimanus AALB008395 I
AARA011580 Anopheles arabiensis AARA011580 I
AATE006049 Anopheles atroparvus AATE006049 I
ACOM033140 Anopheles coluzzii ACOM033140 I
ACUA008166 Anopheles culicifacies ACUA008166 I
ADAC003041 Anopheles darlingi ADAC003041 I
ADIR005534 Anopheles dirus ADIR005534 I
AEPI000232 Anopheles epiroticus AEPI000232 I
AFAF019254 Anopheles farauti AFAF019254 I
AFUN010189 Anopheles funestus AFUN010189 I
AGAP004224 Anopheles gambiae AGAP004224 I
AMAM022585 Anopheles maculatus AMAM022585 I
AMEC016766 Anopheles melas AMEC016766 I
AMEM008752 Anopheles merus AMEM008752 I
AMIN004130 Anopheles minimus AMIN004130 I
AQUA008824 Anopheles quadriannulatus AQUA008824 I
ASIS011648 Anopheles sinensis ASIS011648 I
ASTEI03690 Anopheles stephensi ASTEI03690 I
BGIBMGA010782 Bombyx mori BGIBMGA010782 I
BGLB005077 Biomphalaria glabrata BGLB005077 I
CapteG119973 Capitella teleta CapteG119973 I
CBN26095 Caenorhabditis brenneri CBN26095 I
Cflo_03542--XP_624213.2_APIME Camponotus floridanus Cflo_03542--XP_624213.2_APIME I
CGI_10020896 Crassostrea gigas CGI_10020896 I
CGI_10027031 Crassostrea gigas CGI_10027031 I
CPIJ016038 Culex quinquefasciatus CPIJ016038 I
CpipJ_CPIJ016038 Culex pipiens CpipJ_CPIJ016038 I
DAPPUDRAFT_303110 Daphnia pulex DAPPUDRAFT_303110 I
Hr96 Drosophila melanogaster FBgn0015240 D
Hr96 Drosophila grimshawi FBgn0020174 I
GA11197 Drosophila pseudoobscura FBgn0071252 I
GF16320 Drosophila ananassae FBgn0093341 I
GG11347 Drosophila erecta FBgn0103647 I
GI22223 Drosophila mojavensis FBgn0144951 I
GM17786 Drosophila sechellia FBgn0172693 I
GD21158 Drosophila simulans FBgn0192609 I
GJ24344 Drosophila virilis FBgn0211424 I
GK14276 Drosophila willistoni FBgn0216282 I
GE23543 Drosophila yakuba FBgn0240719 I
GB52904 Apis mellifera GB52904 I
HelroG137640 Helobdella robusta HelroG137640 I
HMEL016865 Heliconius melpomene HMEL016865 I
Hsal_04850--XP_624213.2_APIME Harpegnathos saltator Hsal_04850--XP_624213.2_APIME I
KGM_05575 Danaus plexippus KGM_05575 I
LCUP002913 Lucilia cuprina LCUP002913 I
LDEC005794 Leptinotarsa decemlineata LDEC005794 I
LotgiG122759 Lottia gigantea LotgiG122759 N
MCINX005291 Melitaea cinxia MCINX005291 I
MDOA002084 Musca domestica MDOA002084 I
NV10187 Nasonia vitripennis NV10187 I
Ocbimv22029529m.g Octopus bimaculoides Ocbimv22029529m.g I
PPAI005921 Phlebotomus papatasi PPAI005921 I
SMAR007355 Strigamia maritima SMAR007355 I
TC010645 Tribolium castaneum TC010645 I
tetur17g03630 Tetranychus urticae tetur17g03630 I
tetur34g00750 Tetranychus urticae tetur34g00750 I
YQE_04331 Dendroctonus ponderosae YQE_04331 I