CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra008062
(
Brassica rapa
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
Bra008062
T245038_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra008062.1-P
LOB
19
117
ACAACKYQRKKCTEHCILAPYFPQEKQNQFLNAHKLFGVSNITKFIKGVEECQRDIAMTNLMFHANARARDPVWGVCKIMLDLKNKIACTQAELNLIHQ
Links
Other
LOB
family TFs
Other
Brassica rapa
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo2g079170
Brassica oleracea
Bo2g079170
N
0.929
Bostr.24145s0001
Boechera stricta
Bostr.24145s0001
N
0.768
Cagra.1013s0013
Capsella grandiflora
Cagra.1013s0013
N
0.737
Carubv10021744m.g
Capsella rubella
Carubv10021744m.g
N
0.737