CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0014s16510
(
Populus trichocarpa
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
POPTR_0014s16510
T245903_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0014s16510.1
LOB
14
112
PCAACRMLRRRCDSNCMLAPYFPGDEAEKFFGVHKVFGASNVIRMIQMVDESKKEDAVKAIIYEATSRLRDPVYGSAGTIFHLQRMVEELKMQVESMRA
Links
Other
LOB
family TFs
Other
Populus trichocarpa
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARB_06400
Arthroderma benhamiae
ARB_06400
N
H102_06501
Trichophyton rubrum
H102_06501
N
H105_06538
Trichophyton soudanense
H105_06538
N
MCYG_07778
Microsporum canis
MCYG_07778
N
MCYG_07778
Arthroderma otae
MCYG_07778
N
MGYG_04981
Microsporum gypseum
MGYG_04981
N
TEQG_00252
Trichophyton equinum
TEQG_00252
N
TESG_03415
Trichophyton tonsurans
TESG_03415
N
TRV_01064
Trichophyton verrucosum
TRV_01064
N