CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc01g109240.1
(
Solanum lycopersicum
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
Solyc01g109240.1
T246071_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc01g109240.1.1
LOB
5
103
RCAACKQLRRKCPSNCIFLPYFPPNNPQRFLYVHRIYGASNVGKMLQQVEEHQRGDVADSLYYEAYCRIKNPVYGCVGIITVLHEEIYHVQCQLAKVQA
Links
Other
LOB
family TFs
Other
Solanum lycopersicum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava11118.m1
Manihot esculenta
cassava11118.m1
I
0.707
Solyc06g064540.1
Solanum lycopersicum
Solyc06g064540.1
N
0.828