CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava2716.m1
(
Manihot esculenta
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
cassava2716.m1
T246455_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava2716.m1
LOB
17
115
ACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKNLNQTDKDEAMRTIIFQSDVRANDPVGGCYRIIRELQRQIEYHKAELDLVLH
Links
Other
LOB
family TFs
Other
Manihot esculenta
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400037921
Solanum tuberosum
PGSC0003DMG400037921
N
PGSC0003DMG400039478
Solanum tuberosum
PGSC0003DMG400039478
N
PGSC0003DMG400040550
Solanum tuberosum
PGSC0003DMG400040550
N
PGSC0003DMG400045571
Solanum tuberosum
PGSC0003DMG400045571
N
PGSC0003DMG400046943
Solanum tuberosum
PGSC0003DMG400046943
N
PGSC0003DMG400047167
Solanum tuberosum
PGSC0003DMG400047167
N
Solyc03g059300.1
Solanum lycopersicum
Solyc03g059300.1
N
Solyc03g062670.1
Solanum lycopersicum
Solyc03g062670.1
N
Solyc03g062750.1
Solanum lycopersicum
Solyc03g062750.1
N
Solyc03g114260.1
Solanum lycopersicum
Solyc03g114260.1
N