CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
cassava7497.valid.m1
(
Manihot esculenta
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
cassava7497.valid.m1
T246487_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava7497.valid.m1
LOB
2
104
SCNGCRVLRKGCSETCILRPCLQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPENQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRG
Links
Other
LOB
family TFs
Other
Manihot esculenta
TFs
280 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
1266_YBL103C
Saccharomyces bayanus
1266_YBL103C
I
730_YBL103C
Saccharomyces paradoxus
730_YBL103C
I
SKUD_194803
Saccharomyces kudriavzevii
SKUD_194803
I
SU7_0054
Saccharomyces arboricola
SU7_0054
I
RTG3
Saccharomyces cerevisiae
YBL103C
D