CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
gw1.9.180.1
(
Physcomitrella patens
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
gw1.9.180.1
T246570_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.9.180.1
LOB
4
97
ACAACKYQRRRCTPDCPLSPYFPPDQPKRFQNVHKLFGVSNILRILKHVDPSKREDTVKSIAYEADTREKDPVHGCLGVITILQNQVSKLKDEL
Links
Other
LOB
family TFs
Other
Physcomitrella patens
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA016453
Oryza indica
BGIOSGA016453
N
GSMUA_Achr6G17670_001
Musa acuminata
GSMUA_Achr6G17670_001
N
OBART04G13350
Oryza barthii
OBART04G13350
N
OGLUM04G13190
Oryza glumaepatula
OGLUM04G13190
N
OLONG_015951
Oryza longistaminata
OLONG_015951
N
OMERI04G11960
Oryza meridionalis
OMERI04G11960
N
ONIVA04G11520
Oryza nivara
ONIVA04G11520
N
ORGLA04G0103800
Oryza glaberrima
ORGLA04G0103800
N
ORUFI04G14570
Oryza rufipogon
ORUFI04G14570
N
OS04G0437000
Oryza sativa
OS04G0437000
N
Pavir.Ga01785
Panicum virgatum
Pavir.Ga01785
N
Pavir.J14631
Panicum virgatum
Pavir.J14631
N
Sb06g017190
Sorghum bicolor
Sb06g017190
N
Si011079m.g
Setaria italica
Si011079m.g
N
Si018368m.g
Setaria italica
Si018368m.g
N