Bostr.0556s0333 (Boechera stricta)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Bostr.0556s0333 T246660_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD23
M06964_2.00 		Arabidopsis thaliana
NGCGNDRAWNNCGCN
NGCGNNWTYHNCGCN		 Dap-seq
OMalley et al.(2016)
LBD23_col_a 		0.939 0.939
LBD23
M06965_2.00 		Arabidopsis thaliana
DGCGDDRRWNNCGCN
NGCGNNWYYHHCGCH		 Dap-seq
OMalley et al.(2016)
LBD23_colamp_a 		0.939 0.939
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.0556s0333.1.p LOB 5 103

Links

Other LOB family TFs
Other Boechera stricta TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28200.m000189 Ricinus communis 28200.m000189 I
28623.m000400 Ricinus communis 28623.m000400 I
30147.m014211 Ricinus communis 30147.m014211 I
VND1 Arabidopsis lyrata Al_scaffold_0003_3772 I
AMTR_s00011p00251570 Amborella trichopoda AMTR_s00011p00251570 I
AMTR_s00017p00119990 Amborella trichopoda AMTR_s00017p00119990 I
Aquca_006_00155 Aquilegia coerulea Aquca_006_00155 I
Aquca_013_00692 Aquilegia coerulea Aquca_013_00692 I
NAC007 Arabidopsis thaliana AT1G12260 D
NAC037 Arabidopsis thaliana AT2G18060 D
ANAC076 Arabidopsis thaliana AT4G36160 D
BGIOSGA005950 Oryza indica BGIOSGA005950 I
BGIOSGA011539 Oryza indica BGIOSGA011539 I
BGIOSGA014649 Oryza indica BGIOSGA014649 I
BGIOSGA022108 Oryza indica BGIOSGA022108 I
BGIOSGA033343 Oryza indica BGIOSGA033343 I
Bo1g005810 Brassica oleracea Bo1g005810 I
Bo3g093950 Brassica oleracea Bo3g093950 I
Bo5g017120 Brassica oleracea Bo5g017120 I
Bo7g011640 Brassica oleracea Bo7g011640 I
Bo7g065010 Brassica oleracea Bo7g065010 I
Bo7g117820 Brassica oleracea Bo7g117820 I
Bo8g062650 Brassica oleracea Bo8g062650 I
Bo8g108300 Brassica oleracea Bo8g108300 I
Bostr.0568s0042 Boechera stricta Bostr.0568s0042 I
Bostr.13671s0233 Boechera stricta Bostr.13671s0233 I
Bostr.18351s0273 Boechera stricta Bostr.18351s0273 I
Bostr.22157s0066 Boechera stricta Bostr.22157s0066 I
Bostr.7867s1483 Boechera stricta Bostr.7867s1483 I
Bra011667 Brassica rapa Bra011667 I
Bra012065 Brassica rapa Bra012065 I
Bra016783 Brassica rapa Bra016783 I
Bra017750 Brassica rapa Bra017750 I
Bra019750 Brassica rapa Bra019750 I
Bra026981 Brassica rapa Bra026981 I
Bra039915 Brassica rapa Bra039915 I
BRADI1G52187 Brachypodium distachyon BRADI1G52187 I
BRADI3G50067 Brachypodium distachyon BRADI3G50067 I
BRADI5G16917 Brachypodium distachyon BRADI5G16917 N
BRADI5G27467 Brachypodium distachyon BRADI5G27467 N
Cagra.0568s0135 Capsella grandiflora Cagra.0568s0135 I
Cagra.10427s0040 Capsella grandiflora Cagra.10427s0040 I
Cagra.1670s0031 Capsella grandiflora Cagra.1670s0031 I
Cagra.4734s0006 Capsella grandiflora Cagra.4734s0006 I
Carubv10004997m.g Capsella rubella Carubv10004997m.g I
Carubv10009366m.g Capsella rubella Carubv10009366m.g I
Carubv10022351m.g Capsella rubella Carubv10022351m.g I
Carubv10026898m.g Capsella rubella Carubv10026898m.g I
cassava24947.valid.m1 Manihot esculenta cassava24947.valid.m1 I
cassava26615.m1 Manihot esculenta cassava26615.m1 I
cassava46384.m1 Manihot esculenta cassava46384.m1 I
cassava47039.m1 Manihot esculenta cassava47039.m1 I
Ca_01981 Cicer arietinum Ca_01981 I
Ca_02365 Cicer arietinum Ca_02365 I
Ca_08693 Cicer arietinum Ca_08693 I
Ciclev10006988m.g Citrus clementina Ciclev10006988m.g I
Ciclev10024218m.g Citrus clementina Ciclev10024218m.g I
Ciclev10026114m.g Citrus clementina Ciclev10026114m.g I
Cla005768 Citrullus lanatus Cla005768 I
Cla006372 Citrullus lanatus Cla006372 I
Cla014492 Citrullus lanatus Cla014492 I
Cucsa.043420 Cucumis sativus Cucsa.043420 I
Cucsa.251620 Cucumis sativus Cucsa.251620 I
Cucsa.302120 Cucumis sativus Cucsa.302120 I
Cucsa.320590 Cucumis sativus Cucsa.320590 I
estExt_gwp_gw1.C_2230002 Physcomitrella patens estExt_gwp_gw1.C_2230002 N
Eucgr.A02887 Eucalyptus grandis Eucgr.A02887 I
Eucgr.I02366 Eucalyptus grandis Eucgr.I02366 I
evm.TU.supercontig_29.118 Carica papaya evm.TU.supercontig_29.118 I
evm.TU.supercontig_3.311 Carica papaya evm.TU.supercontig_3.311 I
evm.TU.supercontig_6.226 Carica papaya evm.TU.supercontig_6.226 I
e_gw1.161.49.1 Physcomitrella patens e_gw1.161.49.1 I
e_gw1.201.156.1 Physcomitrella patens e_gw1.201.156.1 I
F775_07224 Aegilops tauschii F775_07224 I
F775_08057 Aegilops tauschii F775_08057 I
F775_20020 Aegilops tauschii F775_20020 I
VND4 Arabidopsis lyrata fgenesh2_kg.1__1330__AT1G12260.1 I
VND5 Arabidopsis lyrata fgenesh2_kg.2__212__AT1G62700.1 I
ANAC076 Arabidopsis lyrata fgenesh2_kg.7__450__AT4G36160.1 I
ANAC105 Arabidopsis lyrata fgenesh2_kg.8__2792__AT5G66300.1 I
gene14869-v1.0-hybrid Fragaria vesca gene14869-v1.0-hybrid I
gene21248-v1.0-hybrid Fragaria vesca gene21248-v1.0-hybrid I
gene32254-v1.0-hybrid Fragaria vesca gene32254-v1.0-hybrid I
GLYMA01G37310 Glycine max GLYMA01G37310 I
GLYMA02G05620 Glycine max GLYMA02G05620 I
GLYMA04G13660 Glycine max GLYMA04G13660 I
GLYMA05G04250 Glycine max GLYMA05G04250 I
GLYMA06G47680 Glycine max GLYMA06G47680 I
GLYMA09G36600 Glycine max GLYMA09G36600 I
GLYMA11G03340 Glycine max GLYMA11G03340 I
GLYMA11G07990 Glycine max GLYMA11G07990 I
GLYMA12G00760 Glycine max GLYMA12G00760 I
GLYMA16G24200 Glycine max GLYMA16G24200 I
GLYMA17G14700 Glycine max GLYMA17G14700 I
Gorai.001G048200 Gossypium raimondii Gorai.001G048200 I
Gorai.003G010700 Gossypium raimondii Gorai.003G010700 I
Gorai.003G114100 Gossypium raimondii Gorai.003G114100 I
Gorai.003G169000 Gossypium raimondii Gorai.003G169000 I
Gorai.004G201100 Gossypium raimondii Gorai.004G201100 I
Gorai.007G048000 Gossypium raimondii Gorai.007G048000 I
Gorai.007G196400 Gossypium raimondii Gorai.007G196400 I
Gorai.008G063600 Gossypium raimondii Gorai.008G063600 I
Gorai.008G236400 Gossypium raimondii Gorai.008G236400 I
GRMZM2G025642 Zea mays GRMZM2G025642 I
GRMZM2G041668 Zea mays GRMZM2G041668 I
GRMZM2G048826 Zea mays GRMZM2G048826 N
GRMZM2G178998 Zea mays GRMZM2G178998 I
GRMZM2G315140 Zea mays GRMZM2G315140 I
GRMZM2G354151 Zea mays GRMZM2G354151 I
GRMZM2G440219 Zea mays GRMZM2G440219 I
GSMUA_Achr11G03040_001 Musa acuminata GSMUA_Achr11G03040_001 I
GSMUA_Achr11G03780_001 Musa acuminata GSMUA_Achr11G03780_001 I
GSMUA_Achr11G17510_001 Musa acuminata GSMUA_Achr11G17510_001 I
GSMUA_Achr3G22360_001 Musa acuminata GSMUA_Achr3G22360_001 N
GSMUA_Achr6G36840_001 Musa acuminata GSMUA_Achr6G36840_001 I
GSMUA_Achr7G06640_001 Musa acuminata GSMUA_Achr7G06640_001 I
GSMUA_Achr8G11590_001 Musa acuminata GSMUA_Achr8G11590_001 I
GSMUA_Achr8G12100_001 Musa acuminata GSMUA_Achr8G12100_001 I
LjSGA_013013.1 Lotus japonicus LjSGA_013013.1 I
LjSGA_069569.1 Lotus japonicus LjSGA_069569.1 I
LPERR02G21010 Leersia perrieri LPERR02G21010 I
LPERR03G01990 Leersia perrieri LPERR03G01990 I
LPERR04G16200 Leersia perrieri LPERR04G16200 I
LPERR06G00240 Leersia perrieri LPERR06G00240 I
LPERR08G00380 Leersia perrieri LPERR08G00380 N
Lus10017915.g Linum usitatissimum Lus10017915.g I
Lus10024601.g Linum usitatissimum Lus10024601.g I
Lus10028372.g Linum usitatissimum Lus10028372.g I
Lus10031142.g Linum usitatissimum Lus10031142.g I
Lus10031721.g Linum usitatissimum Lus10031721.g I
Lus10032238.g Linum usitatissimum Lus10032238.g I
Lus10041822.g Linum usitatissimum Lus10041822.g I
MDP0000131126 Malus domestica MDP0000131126 I
MDP0000136180 Malus domestica MDP0000136180 I
MDP0000176447 Malus domestica MDP0000176447 I
MDP0000221977 Malus domestica MDP0000221977 I
MDP0000226701 Malus domestica MDP0000226701 I
MDP0000246470 Malus domestica MDP0000246470 I
MDP0000254112 Malus domestica MDP0000254112 I
MDP0000298965 Malus domestica MDP0000298965 I
MDP0000299959 Malus domestica MDP0000299959 I
MDP0000320566 Malus domestica MDP0000320566 I
mgf020336m Mimulus guttatus mgf020336m I
mgf021916m Mimulus guttatus mgf021916m I
mgf022574m Mimulus guttatus mgf022574m I
MLOC_15746 Hordeum vulgare MLOC_15746 I
MLOC_19933 Hordeum vulgare MLOC_19933 N
MLOC_53086 Hordeum vulgare MLOC_53086 I
MLOC_56103 Hordeum vulgare MLOC_56103 I
MLOC_56769 Hordeum vulgare MLOC_56769 I
MTR_4g036030 Medicago truncatula MTR_4g036030 I
MTR_4g101680 Medicago truncatula MTR_4g101680 I
MTR_5g012080 Medicago truncatula MTR_5g012080 I
MTR_5g021710 Medicago truncatula MTR_5g021710 I
OB02G33070 Oryza brachyantha OB02G33070 I
OB03G12100 Oryza brachyantha OB03G12100 I
OB04G27030 Oryza brachyantha OB04G27030 I
OB06G10310 Oryza brachyantha OB06G10310 I
OB08G10370 Oryza brachyantha OB08G10370 N
OB10G23740 Oryza brachyantha OB10G23740 I
OBART02G25700 Oryza barthii OBART02G25700 I
OBART03G02180 Oryza barthii OBART03G02180 I
OBART04G20020 Oryza barthii OBART04G20020 I
OBART06G00240 Oryza barthii OBART06G00240 I
OBART10G16620 Oryza barthii OBART10G16620 I
OGLUM02G26220 Oryza glumaepatula OGLUM02G26220 I
OGLUM03G02130 Oryza glumaepatula OGLUM03G02130 I
OGLUM04G19900 Oryza glumaepatula OGLUM04G19900 I
OGLUM06G00210 Oryza glumaepatula OGLUM06G00210 I
OGLUM08G00350 Oryza glumaepatula OGLUM08G00350 N
OGLUM10G16690 Oryza glumaepatula OGLUM10G16690 I
OLONG_005741 Oryza longistaminata OLONG_005741 N
OLONG_011521 Oryza longistaminata OLONG_011521 I
OLONG_016152 Oryza longistaminata OLONG_016152 I
OLONG_018618 Oryza longistaminata OLONG_018618 I
OMERI02G25220 Oryza meridionalis OMERI02G25220 I
OMERI03G02020 Oryza meridionalis OMERI03G02020 I
OMERI03G30800 Oryza meridionalis OMERI03G30800 I
OMERI06G00230 Oryza meridionalis OMERI06G00230 I
OMERI08G00600 Oryza meridionalis OMERI08G00600 N
OMERI10G13220 Oryza meridionalis OMERI10G13220 I
ONIVA02G28150 Oryza nivara ONIVA02G28150 I
ONIVA03G01790 Oryza nivara ONIVA03G01790 I
ONIVA04G18230 Oryza nivara ONIVA04G18230 I
ONIVA06G00260 Oryza nivara ONIVA06G00260 I
ONIVA10G18400 Oryza nivara ONIVA10G18400 I
OPUNC02G23550 Oryza punctata OPUNC02G23550 I
OPUNC03G01920 Oryza punctata OPUNC03G01920 I
OPUNC04G17680 Oryza punctata OPUNC04G17680 I
OPUNC06G00220 Oryza punctata OPUNC06G00220 I
OPUNC08G00360 Oryza punctata OPUNC08G00360 N
orange1.1g018596m.g Citrus sinensis orange1.1g018596m.g I
orange1.1g020354m.g Citrus sinensis orange1.1g020354m.g I
orange1.1g021187m.g Citrus sinensis orange1.1g021187m.g I
ORGLA03G0019500 Oryza glaberrima ORGLA03G0019500 I
ORGLA04G0171200 Oryza glaberrima ORGLA04G0171200 I
ORGLA06G0002300 Oryza glaberrima ORGLA06G0002300 I
ORUFI02G27110 Oryza rufipogon ORUFI02G27110 I
ORUFI03G01920 Oryza rufipogon ORUFI03G01920 I
ORUFI04G21580 Oryza rufipogon ORUFI04G21580 I
ORUFI06G00250 Oryza rufipogon ORUFI06G00250 I
ORUFI08G00330 Oryza rufipogon ORUFI08G00330 N
ORUFI10G17730 Oryza rufipogon ORUFI10G17730 I
OS02G0643600 Oryza sativa OS02G0643600 I
OS04G0536500 Oryza sativa OS04G0536500 I
OS06G0104200 Oryza sativa OS06G0104200 I
OS08G0103900 Oryza sativa OS08G0103900 N
OS10G0532000 Oryza sativa OS10G0532000 I
Pavir.Da02426 Panicum virgatum Pavir.Da02426 I
Pavir.Gb00744 Panicum virgatum Pavir.Gb00744 I
Pavir.Ia02924 Panicum virgatum Pavir.Ia02924 I
Pavir.Ib00161 Panicum virgatum Pavir.Ib00161 I
Pavir.Ib02477 Panicum virgatum Pavir.Ib02477 I
Pavir.J07126 Panicum virgatum Pavir.J07126 I
Pavir.J09314 Panicum virgatum Pavir.J09314 N
Pavir.J26987 Panicum virgatum Pavir.J26987 I
Pavir.J32898 Panicum virgatum Pavir.J32898 I
Pavir.J39804 Panicum virgatum Pavir.J39804 I
PDK_20s1306451g001 Phoenix dactylifera PDK_20s1306451g001 I
PDK_20s1423861g001 Phoenix dactylifera PDK_20s1423861g001 N
PDK_20s1503311g001 Phoenix dactylifera PDK_20s1503311g001 I
PGSC0003DMG400004740 Solanum tuberosum PGSC0003DMG400004740 I
PGSC0003DMG400021576 Solanum tuberosum PGSC0003DMG400021576 I
PGSC0003DMG401003552 Solanum tuberosum PGSC0003DMG401003552 I
PK11173.1 Cannabis sativa PK11173.1 I
PK23416.1 Cannabis sativa PK23416.1 I
PK28510.1 Cannabis sativa PK28510.1 I
Pm019488 Prunus mume Pm019488 I
Pm019490 Prunus mume Pm019490 I
Pm023559 Prunus mume Pm023559 I
Pm026735 Prunus mume Pm026735 I
POPTR_0001s00220 Populus trichocarpa POPTR_0001s00220 I
POPTR_0003s11250 Populus trichocarpa POPTR_0003s11250 I
POPTR_0005s11870 Populus trichocarpa POPTR_0005s11870 I
POPTR_0007s13910 Populus trichocarpa POPTR_0007s13910 I
POPTR_0012s14660 Populus trichocarpa POPTR_0012s14660 I
POPTR_0015s14770 Populus trichocarpa POPTR_0015s14770 I
PRUPE_ppa015786mg Prunus persica PRUPE_ppa015786mg I
PRUPE_ppa020139mg Prunus persica PRUPE_ppa020139mg I
PRUPE_ppa022264mg Prunus persica PRUPE_ppa022264mg I
SapurV1A.0129s0210 Salix purpurea SapurV1A.0129s0210 I
SapurV1A.0166s0460 Salix purpurea SapurV1A.0166s0460 I
SapurV1A.0367s0210 Salix purpurea SapurV1A.0367s0210 I
SapurV1A.0487s0230 Salix purpurea SapurV1A.0487s0230 I
SapurV1A.0634s0120 Salix purpurea SapurV1A.0634s0120 I
SapurV1A.1275s0070 Salix purpurea SapurV1A.1275s0070 I
SapurV1A.3982s0010 Salix purpurea SapurV1A.3982s0010 I
Sb01g030760 Sorghum bicolor Sb01g030760 I
Sb01g048730 Sorghum bicolor Sb01g048730 I
Sb04g033570 Sorghum bicolor Sb04g033570 I
Sb06g023780 Sorghum bicolor Sb06g023780 I
Sb06g034010 Sorghum bicolor Sb06g034010 N
Sb07g000470 Sorghum bicolor Sb07g000470 N
Sb10g000460 Sorghum bicolor Sb10g000460 I
SELMODRAFT_100973 Selaginella moellendorffii SELMODRAFT_100973 I
SELMODRAFT_402243 Selaginella moellendorffii SELMODRAFT_402243 I
SELMODRAFT_408624 Selaginella moellendorffii SELMODRAFT_408624 I
SELMODRAFT_451784 Selaginella moellendorffii SELMODRAFT_451784 I
SELMODRAFT_57388 Selaginella moellendorffii SELMODRAFT_57388 I
SELMODRAFT_71405 Selaginella moellendorffii SELMODRAFT_71405 I
Si006829m.g Setaria italica Si006829m.g I
Si010504m.g Setaria italica Si010504m.g I
Si017679m.g Setaria italica Si017679m.g I
Si036363m.g Setaria italica Si036363m.g I
Si039467m.g Setaria italica Si039467m.g I
Solyc02g084350.2 Solanum lycopersicum Solyc02g084350.2 I
Solyc06g034340.1 Solanum lycopersicum Solyc06g034340.1 I
Solyc08g079120.1 Solanum lycopersicum Solyc08g079120.1 I
TCM_000235 Theobroma cacao TCM_000235 I
TCM_014939 Theobroma cacao TCM_014939 I
TCM_016035 Theobroma cacao TCM_016035 I
Thhalv10007823m.g Eutrema salsugineum Thhalv10007823m.g I
Thhalv10022756m.g Eutrema salsugineum Thhalv10022756m.g I
Thhalv10025510m.g Eutrema salsugineum Thhalv10025510m.g I
Traes_2AL_82C3E7E14 Triticum aestivum Traes_2AL_82C3E7E14 I
Traes_2BL_24E6E8DF9 Triticum aestivum Traes_2BL_24E6E8DF9 I
Traes_2DL_343FA6101 Triticum aestivum Traes_2DL_343FA6101 I
Traes_4AL_F853C8660 Triticum aestivum Traes_4AL_F853C8660 I
Traes_4BL_03B8EA3BF Triticum aestivum Traes_4BL_03B8EA3BF I
Traes_4DL_54E14ABCB Triticum aestivum Traes_4DL_54E14ABCB I
Traes_5AL_DD30903BD Triticum aestivum Traes_5AL_DD30903BD I
Traes_6AL_BB7207AD1 Triticum aestivum Traes_6AL_BB7207AD1 I
Traes_6BL_8F77BF933 Triticum aestivum Traes_6BL_8F77BF933 I
Traes_6DL_D0BE06357 Triticum aestivum Traes_6DL_D0BE06357 I
Traes_7AS_6398221B7 Triticum aestivum Traes_7AS_6398221B7 I
Traes_7DS_7F0AF83B0 Triticum aestivum Traes_7DS_7F0AF83B0 I
TRIUR3_08851 Triticum urartu TRIUR3_08851 I
TRIUR3_20707 Triticum urartu TRIUR3_20707 I
VIT_02s0154g00020 Vitis vinifera VIT_02s0154g00020 I
ANAC076 Vitis vinifera VIT_04s0023g03110 I
VIT_16s0022g00690 Vitis vinifera VIT_16s0022g00690 I